| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1052 |
|---|
| Symbol | |
|---|
| ID | 8323116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1088132 |
|---|
| End bp | 1089232 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644952176 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003109660 |
|---|
| Protein GI | 256371836 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2516] Biotin synthase-related enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.652305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT CGACGCCCCT CGCCCTGCGC CGACGACGGA CGCTGGGTGA GCACGAGAGC
CCGGAGTGGG TGCGGATCTC GGCCGCCTCG GCGATCGCAC TCGGGTTCCG CTCCGGTCGC
TTCAGCAGAG ACTTCGCCTT CGGCGGGATC AACCTCTTGC TCAATTACGG GGACGGCTGC
CGGAGCGACT GCGGCTACTG CGGCCTCGCG CGGACCCGCC CCGGCGACTA CGAGGACAAG
TCGTTCATCA GAGTGGAGTG GCCCCTCGTG CGCACAGACG ACCTTGTGGA GCGCATGGCG
ATGCTCGAGC GACGCCTGAC CCGTCTGTGC ATCTCCATGG TGACCTCTCC CTACGCCTTC
GAGGACACGT GCGAGATCAC CGAGCGCATC CGAGCGCGCG TCCGCACCCC CCTCTCCATC
CTCGTTGCCC CACCGACACT GAACCGTCGC AAGCTCGAGC GCTTTCGCAG GCTGGGGGTG
GACATGATCG GCATCGGCCT CGACGCCGTG ACCGAACAAC TCTTCCGCTC GCTGCGAACC
GATGTCCCCG CTGGAGGCGC TGGACTGTCC TGGGCCAAGT ATTGGCAGGT CGTCGACGAT
GCCCGAGAGC TCTTCGGTCC ATGGAAAGTG AACTGTCACA CGGTGGTAGG CCTCGGGGAA
CGAGACCGTG ATCTGATCGA GCTCTTCGTC CGGCTCCTCG ACCGACAGAT CCTTCCGTAT
CTCTTCTGCT TCAATCCCGA GCCCGACTCC CGGATGGGGG CCGTGCCGAA GACCTCGATT
ACCCGTTGGC GTCGGATCCA GCTCGCCAAA CACCTCATCG AGCACGACGG TTTCGGGGTC
GAGGACTTCT CGTTCGACGA CGCAGGGAGC CTCGTCGCGG TGCGAGCGGT TCAGCGCGAC
ACCCTCTTGC GCGTCGCCAA CGAGGGGCTG GCTTTCATGA CCAACGGCTG CCCAGGCGAG
GACGGCTCCC CTGGGTGCAC CCGGCCCTAC GGGTCCTACC GAGCCAGCGA GCCGTTCCGC
GACTTCCCTT TCCGTCCCAC TGCCGACGAC CTCGAAGGCA TCCTCCGCGA GCTCAACGCC
GAGGCACTCT TCGTGGAGTG A
|
|---|
| Protein sequence | MTTSTPLALR RRRTLGEHES PEWVRISAAS AIALGFRSGR FSRDFAFGGI NLLLNYGDGC
RSDCGYCGLA RTRPGDYEDK SFIRVEWPLV RTDDLVERMA MLERRLTRLC ISMVTSPYAF
EDTCEITERI RARVRTPLSI LVAPPTLNRR KLERFRRLGV DMIGIGLDAV TEQLFRSLRT
DVPAGGAGLS WAKYWQVVDD ARELFGPWKV NCHTVVGLGE RDRDLIELFV RLLDRQILPY
LFCFNPEPDS RMGAVPKTSI TRWRRIQLAK HLIEHDGFGV EDFSFDDAGS LVAVRAVQRD
TLLRVANEGL AFMTNGCPGE DGSPGCTRPY GSYRASEPFR DFPFRPTADD LEGILRELNA
EALFVE
|
|---|
| |