Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0951 |
Symbol | |
ID | 8323015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 971587 |
End bp | 974151 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952079 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003109563 |
Protein GI | 256371739 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.197115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTCGA ATGACCTGAG ACGTGCGTTT CGGGAGTACT TCGTCGAGCG AGGACACGTT CCCGTTCCCT CGGCGTCGCT CGTGCCGCAC GATCCGACGC TGCTCTTCAC GGTCGCGGGC ATGGTGCCGT TCAAGCCCTA CTTCTTGGGC GAGGAGGTCC CGCCGTATCG TCGGGCGACC AGCATCCAAA AGTGCATGCG CGCCGGTGGC AAGCACAACG ATCTCGATCA GGTGGGGACC ACGGCCCGAC ACCTCACCTT CTTCGAGATG CTGGGCAACT TCTCCTTCGG CGACTACTTC AAGGAGGGTG CGATTCCCTA CGCGTGGGGT CTCGTCACCG AGGTGCTCGG ACTCGATCCA GACCGGCTCT GGATCACGGT GCACACGAGC GACGACGAGG CGGAGCGCAT CTGGATCGAG GCCTGTGGGG TCCGCCCGGA GCGCATCCAA CGACTCGACG AGGACAACTG GTGGCAGATG GGGGAGACAG GGCCGTGCGG TCCGTGCTCT GAGATCTACT ACGACAAGGG CGAGTCCTAC GGCGCGGGCG GTGGGCCGGC GGTCGGGTCC GACGAGCGCT TCCTCGAGAT CTGGAACCTC GTGTTCATGC AGTACGACCG CCACCCGGAC GGTTCGTTGA CGCCGCTGCC GGCACCCTGC ATCGACACCG GTGCCGGGCT CGAGCGGATC GTGCCGGTGC TCCAGGGGCA CGACTCGGTC TTCGAGACCG ATCTCATGTG GCCGCTCATG GAGGAGGCAC AGTCGCTGAC GGGCCGACGC TACGGCGGTC GCTTCGGTGC GGACGCCGGT GGCGACGTCG GGCTGCGGAT CATGGCCGAT CACGCTCGGG CGACGACGTT CTTGCTCGCT GACGGGGTCG TGCCGACGAA CGAGGGGCGT GGGTACGTGC TGCGTCGTAT CATCCGGCGT CTCGTGGCGC GCGCGCAGCT GTTGGGCGCG AAGGGTCCGG TCGTCGAGCC GATGGTGCGC ATGACCGCCG CCGTGATGGG CGAGGCCTAC CCCGAGGTGG CGCGCGAGCT CGAGACGATC GTGCAGCACG CAGCGCGCGA GGAGGAGCGG TTCGCGGCGA CGCTGGCGCT GGGGCGCCCG CTGCTCGACG CGGCCCTCGA GGGCGGCTCG GTTCCCGGCG CGCTCGCGTT CAAGCTCCAC GACACCTACG GTTTGCCGAT CGAGCTCACG ATGGAGCTGG CGGCCGAGCG GGGGGTGAGC GTCGATCGTG CCGGTTTCGA GGAGGCCATG GCCGCACAGC GCGAGCGGGC CCGCCAGGCC GGGCTCGGTA CCGAGGCCGT GGAGCACCCG GTGAGCGCCG AGGTGCTGCG CGAGCACGGC CGGAGCGAGT TCACGGGCTA CGAGGCCACC GAGGACGAGG GGCGCCTGCT CGCACTCGCC TCCGAAGGCG ACGTGCTCGT CGCCGTCCTC GATCGAACGC CCTTCTATCC CGAAGGTGGT GGCCAGCTCG GTGATACCGG CACGATCGAG GGGGATGGCT TTCGCCTCAC CATCATCGAC ACCGACCAGC CCGTCGCGGG GGTGATCCGC CACCACGTCG GAGCGGTCGA GGGCGAGCCG GTGATCGGGG CGTTGGTGCG GGCCGTCGTC GACGCGGAGC GGCGCGAGGG TCTTCGGGTC CACCACACGG CGACGCACCT GCTGCACTGG GCGCTTCGCG AGGTGCTCGG TCCGCACGTC AAGCAACAAG GCTCCCTGGT CGCACCGGAT CACCTGCGCT TCGACTTCAC GCACTGGGGA CCGCTCACGC CCGACGAGAT CGAGGAGATC GAGCGGCGGG TCGCGGCCGA GATCATCCGC GACTCGGTCG TCACGGTGGA GCTCATGGAT CGCGACGAGG CGATCCGTCG CGGTGCGGTC GCCTTCTTCG GCGATCGCTA CGGCGACGTC GTTCGCGTGG TGCACGCCGG TGAGTCGTCG GTGGAGCTGT GCGGTGGGAC GCACCTCGAC CGACTCGGCC GCATCGGCCA CCTGCGCATC ACGTCCGAGA GCTCGATCGG CGCCAACACG CGCCGGGTCG AAGCCGTCGT GCAGCTCGCC GCCCTCGAGG TGGCACACCG CGATCGGCGA CTCCTCGACG AGCTCGAGCG GATCGTCCCG GGCGGACGCG ATGGGATCGG CGAGCGCGTC GATCGCATCG TCGAGCGTGC CAAGCGCGCC GAATCCGAGC TCGCGCGTGA GCGCACGCGC ACCTTGGCTG AGCGCGCCCG CGCGCTCGCC GAGACCCGGG GGGCCGACGG ACTCGTGGTG GCGCGCGTGG ACGGTCTTGA CCAGCGGGGG GTTCGGGAGC TCGCGATGCT GGTTCGTGAC CACGAGGGCG TGCTGGGCGT CGTGATCGGG GGCGTCGCCA ACGGCGTGGT CGCACTCGCC GCCGCGGTGC GCGAGGGCGC TCCCTGGCGT GCCGACGAGC TGCTGCGCCC CGTCGCGCAG GCGGTCGGTG GGGGCGTCGG TCGAGCCGAG GTGGTGGCGG TCTCCGGTGG GCGCCGTGCC GAAGCCCTTG ACGCGGCGCT CGAGGCGGTG CGGACGGCTT CGTGA
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Protein sequence | MDSNDLRRAF REYFVERGHV PVPSASLVPH DPTLLFTVAG MVPFKPYFLG EEVPPYRRAT SIQKCMRAGG KHNDLDQVGT TARHLTFFEM LGNFSFGDYF KEGAIPYAWG LVTEVLGLDP DRLWITVHTS DDEAERIWIE ACGVRPERIQ RLDEDNWWQM GETGPCGPCS EIYYDKGESY GAGGGPAVGS DERFLEIWNL VFMQYDRHPD GSLTPLPAPC IDTGAGLERI VPVLQGHDSV FETDLMWPLM EEAQSLTGRR YGGRFGADAG GDVGLRIMAD HARATTFLLA DGVVPTNEGR GYVLRRIIRR LVARAQLLGA KGPVVEPMVR MTAAVMGEAY PEVARELETI VQHAAREEER FAATLALGRP LLDAALEGGS VPGALAFKLH DTYGLPIELT MELAAERGVS VDRAGFEEAM AAQRERARQA GLGTEAVEHP VSAEVLREHG RSEFTGYEAT EDEGRLLALA SEGDVLVAVL DRTPFYPEGG GQLGDTGTIE GDGFRLTIID TDQPVAGVIR HHVGAVEGEP VIGALVRAVV DAERREGLRV HHTATHLLHW ALREVLGPHV KQQGSLVAPD HLRFDFTHWG PLTPDEIEEI ERRVAAEIIR DSVVTVELMD RDEAIRRGAV AFFGDRYGDV VRVVHAGESS VELCGGTHLD RLGRIGHLRI TSESSIGANT RRVEAVVQLA ALEVAHRDRR LLDELERIVP GGRDGIGERV DRIVERAKRA ESELARERTR TLAERARALA ETRGADGLVV ARVDGLDQRG VRELAMLVRD HEGVLGVVIG GVANGVVALA AAVREGAPWR ADELLRPVAQ AVGGGVGRAE VVAVSGGRRA EALDAALEAV RTAS
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