| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0640 |
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| Symbol | |
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| ID | 8322700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 646582 |
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| End bp | 647478 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644951779 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003109267 |
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| Protein GI | 256371443 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.951154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGG GCATCTACCT CGTCGATAAG CCGAGCGGCC CGACCTCCCA CGACGTCGTG
GCTCGAGCTC GGCGTGCGTT CGGCACGCGG CGCGTCGGTC ACGCCGGGAC GCTCGATCCG
ATGGCGAGCG GACTGCTCGT GCTCGGTGTC GATCGCGCGA CCCGGCTGCT CCGCTACCTC
GAGGCCCAGA CGAAGCGCTA TCGGGCCGTC GCGCTCCTCG GCGTTGCGAC CGATACCGAC
GATCTCGACG GTGTCGTCGT CGATCGGCGA CCGGTCGAGG AGCCGACCCG CGAGGCCGTG
GTGACGGCGT GCCGTCGCTT CGTGCCGGGT TACGACCAGG TGCCACCGGC CTACAGCGCG
CTGCACCTCG ACGGCGAGCG TGCCTACGTG CGGGCTCGCC GGGGTGAGGA CGTCACGTTG
CCTCGTCGGC GGGTTCGCAT CGACGAGATC GAGGTGGGTG CGATCTGGCG CGATGGCGGC
CCAGGGGAGC CCCAGGGCGT TCGCGTCGAG CTCACCGTCA CCTGTGGCCC CGGAACCTAC
CTCCGCTCGC TGGTACGTGA CCTCGGTGAG GCGCTCGGCA CGCCCGCGAC GCTCGCGTCG
CTTCGGCGCG AGCGTGTCGG TCGGCTGGAG GTCGCCCAGG CGGTGGGGCT CGAGGACCTC
GAGCGAGCGA CACCGGTCCC GCTTCCGCTG GCGCTCGCTG GTCTCGGCCG TGTCGAACTC
GACGGGGTCG ACGCCACGAG GTTCCTCCAT GGTCAGCGCA TCGAGGCGCC GTCGGGTCTC
GACGAGGGCG ACGTGCTCGT CGGTGCCGAG GGTTCGTGGT TGGGGGTGGC GAGCTGTGAC
GGCCACGTGC TCGCACCGCG CGTGGTGCTC GTCGATGCGG GAGTTGCGCG GGCATGA
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| Protein sequence | MIQGIYLVDK PSGPTSHDVV ARARRAFGTR RVGHAGTLDP MASGLLVLGV DRATRLLRYL
EAQTKRYRAV ALLGVATDTD DLDGVVVDRR PVEEPTREAV VTACRRFVPG YDQVPPAYSA
LHLDGERAYV RARRGEDVTL PRRRVRIDEI EVGAIWRDGG PGEPQGVRVE LTVTCGPGTY
LRSLVRDLGE ALGTPATLAS LRRERVGRLE VAQAVGLEDL ERATPVPLPL ALAGLGRVEL
DGVDATRFLH GQRIEAPSGL DEGDVLVGAE GSWLGVASCD GHVLAPRVVL VDAGVARA
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