Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0027 |
Symbol | |
ID | 8322073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 28705 |
End bp | 30312 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951174 |
Product | integral membrane protein MviN |
Protein accession | YP_003108675 |
Protein GI | 256370851 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCAGG CGCGTCTCGT GCGGCTGCTG GCCGGTCGCG GTCGTTCGGT GGGCGAGAAC GCCACCGCCA TGGCGATCGG GACGGCGGCA AGTCGTCTCA GCGGGTTCGT GCGCCTGATC GTCCTCGCGG TGGTGCTCGG GGTGCGTCCG TTGGCCGACG CCTTCAACCT GGCGAACAAC ACGCCGAACA TGCTCTACGA CCTGTTGCTC GGTGGAGTGA TCAGCTCGAC GATCCTTCCC GTCGTGGCGG CTCGGATCGC GAGGGCGGGG GAGCGAGCCG GCGAGCGCTC GCTCGCTGCG ATCATGACGA TCGGGGTGGT GGGCCTCCTC GTGGCCACGG TGCTCTTCGA GGTCCTCGCC CCGGCCGTCG TCGATCTCTA CCTCATCGGC GACCATCTTG CGGCTGCGGG CACGGAGCGC GCGGTCGCGA TCGAGCTGTT GCGCTTGTTT GCACCGCAGC TCTTCTTCTA CGGCACGATC TCCCTCGCCA CCGCGGCGCT CAACCTGCGG GGCAACTTTG CCGCCCCCGC CTTTGCGCCG ATCGCGAACA ACGTCGTGGC GATCGCGGTG CTCGTCGCGT TCAGGGTCGC TGACGGCTCT GCCACCCTCG ACGAGGTCGC CTCCCGTCCG GACGCGGTGC TGCTGCTCGG GCTCGGAACG ACGCTCGGGG TGGCGGCCCA GCTCGGCGTG CTCATGCCGG TGATGGCGAG GCTCGGTCTC GGACTGCGTC CACGTCTGCG CGTCAGCGAC CCCGCGGTTC GCGAGGTCGT CTCGCTGTCC GGCTGGACGG CGGGCTACGT CGTCGCCAAC CAGGTCGCTC TCTTCGTGGT GCTCGCCCTT GCCGCGACGC GGGCCGGCTA CGTGTCGGCC TACAACTACG CCTACCTGTT CTTCCAGCTC CCGTATGCGG TGGTGTCGCT GAGCGTGATG AGTGCGCTCC AGCCCAGGCT CGCACGCTCG TGGGCAGCTG GCGATCGAGC GAGATTCCGG CGTGATCTCG CCAAGGCGCT CGCCGTCGGC GTCGGTGCCA CCATCCCTCT CGCGGTGCTC GCGTGGGTGG GGGGACCTGC CGGCCTCGAT CTCCTCGTCG GCTATGGGGC GGTCAACGAG CACGGCGTCG CCCTCATCGC GGGTGCGCTC CGCGGCATGG CGGTCGGGTT GCCCGGTTTC TCGCTCTTTC TGATGCTGAT CCAGGCGCTC CAGGCCATGC GCAATGCTCG AGCTGCGTTC GTCGCCTACC TGGTCGAGAA CGGATTGAAC ATCGTCCTCG CCGTCGTCGC GCTCGGTCCG CTGGGGGTCG AGGGCCTCGG GCTCGCGCTG GGACTCGCCT ACACCATCGG CGCCATCGTC GCGATCGTCA TCGTTCGCTC GCTGCGGGGA CTCGGCCCCA TCGCGCCGCT CCTCGGCTCG TGGGTGCAGC TCGCCGTCGC AAGTGTCGTC GGTGGCGCCG TGCTGGCCGC GCTCCTCCCT AGCACGCTCG TCGCGCCGAA CCTTGGTTTT GCCCTGCGTG TCCTCGGCGG GTTGGTCGCG GGGGTGGTAG TCTTCGGCGC TGCGGTGATC GGCCTCCGCA CAATCCGAGT GGCCGTGGCG AGGGGAGTCG GACGGTGA
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Protein sequence | MVQARLVRLL AGRGRSVGEN ATAMAIGTAA SRLSGFVRLI VLAVVLGVRP LADAFNLANN TPNMLYDLLL GGVISSTILP VVAARIARAG ERAGERSLAA IMTIGVVGLL VATVLFEVLA PAVVDLYLIG DHLAAAGTER AVAIELLRLF APQLFFYGTI SLATAALNLR GNFAAPAFAP IANNVVAIAV LVAFRVADGS ATLDEVASRP DAVLLLGLGT TLGVAAQLGV LMPVMARLGL GLRPRLRVSD PAVREVVSLS GWTAGYVVAN QVALFVVLAL AATRAGYVSA YNYAYLFFQL PYAVVSLSVM SALQPRLARS WAAGDRARFR RDLAKALAVG VGATIPLAVL AWVGGPAGLD LLVGYGAVNE HGVALIAGAL RGMAVGLPGF SLFLMLIQAL QAMRNARAAF VAYLVENGLN IVLAVVALGP LGVEGLGLAL GLAYTIGAIV AIVIVRSLRG LGPIAPLLGS WVQLAVASVV GGAVLAALLP STLVAPNLGF ALRVLGGLVA GVVVFGAAVI GLRTIRVAVA RGVGR
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