| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6930 |
|---|
| Symbol | |
|---|
| ID | 8331150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8060923 |
|---|
| End bp | 8061864 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644947361 |
|---|
| Product | PfkB domain protein |
|---|
| Protein accession | YP_003104571 |
|---|
| Protein GI | 256380911 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGTTG TCCTGTGTGT CGGGCTGACG ACCGTCGATG TCACCCAACA GGTGGATGAG
TTCCCGGAAC CGGGCGAAAA GATGCAGTCC CTCGCCGCCT TCACGTCACC CGGTGGTCCC
GCCGCCAACG CGGCCACCGC CGTCGCCGCC CTCGGCCACC GCGCCGTCCT GGTCACCGCC
GCCGGGTCCG ACCCGCTCGG CGCGCTCGCC CTGCGCGGCC TCGCCGACCG CCGCGTCGAG
GTGGTCGACA CCGCCCCCGA GGACTTCCGG ATCGCGCTCA GCATGGTCGT CGTGCGGGCG
GGCGACGGCG AGCGCACCGT CGTGTCCCGC AACGCGGGCG GCCACCTGCC CGCCGTGCCC
GCCGACCTGC CCGACCGGGT CGCCGAGGCG GACGTGCTGC TGCTCGACGG CCACCTCGGC
CCGCTGGCGC TCGCCGCCGC CCGCTCGGCG CGCGGGCGCG GCGTGCCGGT GGTGCTGGAC
GCCGGGAGCT GGAAGCCTGT CCTGGACGAC CTGCTGCCGC TGGTGGACGT CGCCGCCTGC
TCGGCAGCCT TCCCGCTGAC CGAGCGCGCG GTGCACGACC GGGGCGTGCC GCTGGTGATC
CGGACGCGCG GCGCCCTCCC CGTGACCTGG TCGAACCGCA CCACCGCCGG ACCGGCGCGC
CCCGAGCCGG GAGCGGCCGG GGCGGGCACG ACCCCGGCGG GGAGCGCGGG GCCCGACGGC
GGCCCGGTGG TTTCGGCGGG CGAGGTCCCG GTGACCCCGG TGCCGGTGCG GGACACCAAC
GGCGCGGGCG ACGTGTGGCA CGGCGCTCTG GCGGTCGCCC TCGCGCGGCG CGAACCGGTG
GCGCGGGCCG TCGCGTGGGC CAACGAGGTC GCGGCGGTCC GGGTGCGCAA CCCGGCCGAG
CGCTGGGTCG AGGAGTTGTG GCGGTGGCGG GACAGCGGGT GA
|
|---|
| Protein sequence | MAVVLCVGLT TVDVTQQVDE FPEPGEKMQS LAAFTSPGGP AANAATAVAA LGHRAVLVTA
AGSDPLGALA LRGLADRRVE VVDTAPEDFR IALSMVVVRA GDGERTVVSR NAGGHLPAVP
ADLPDRVAEA DVLLLDGHLG PLALAAARSA RGRGVPVVLD AGSWKPVLDD LLPLVDVAAC
SAAFPLTERA VHDRGVPLVI RTRGALPVTW SNRTTAGPAR PEPGAAGAGT TPAGSAGPDG
GPVVSAGEVP VTPVPVRDTN GAGDVWHGAL AVALARREPV ARAVAWANEV AAVRVRNPAE
RWVEELWRWR DSG
|
|---|
| |