Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6746 |
Symbol | |
ID | 8330962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7879181 |
End bp | 7879999 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644947175 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003104389 |
Protein GI | 256380729 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.249045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGGA GGCCGCCGGC CAGGAAGATC CCGGTCGGGC TCTCCACCGC CTCGGTGTGG CCCCAGCCCG CCGCCTCCGC CTTCGAGTCG GCGGCCGAGC TGGGCTACGA CGGCGTCGAG GTCATGGTCT GGGCCGACCC GGTCAGCCAG GACGTGGCCG CGCTCGGCAG GCTGGTCGAG CGCAGCGGCG TCCCGGTGCT GGCCGTGCAC GCCCCGTGCC TGCTGATCAG CCAGCGGGTC TGGTCGTCCG ACCCGGTGGA GCGGCTGCGG CGCAGCGTGC GCGCGGCCAC CGAGCTGGGC GCGCCGACCG TGGTGCTGCA CCCGCCGTTC ATCTGGCAGC GCCGCTACGC CGAGGTGTTC CCGGCGCTGG TGGCCGAGCT GGAGGACCAG ACCGGCATCG CGATCGCCGT CGAGAACATG TTCCCGGTGC GCAGCGGCCT CGGCCGGGGC CGGTCGGTGG CCATGACGGC GTTCAAGCCC TCGATCGACC CGACCGACGT CGGGCACCGG CACTACACGC TCGACCTGTC CCACACGGCC GCCGCGCAGA TGGACGCGCT GGAGCTGGCC AAGCGGATGG GCGACGGGCT CACCCACGTG CACCTGGCGG ACGGCAGCGG GGCGTCCAAG GACGAGCACA TGGTGCCCGG CCGGGGCAAC CAGCCGTGCG CGCAGCTGTG CGAGGGCCTG GCCAGCGGCG GGTTCGCCGG GCAGGTGGTG CTGGAGGTGA ACACCCGCAA GGCCAGGAGC ACCGCCGAGC GCACCGAGAT GCTGAACGAG GCGCTCCTCT TCGCGCGCCT GCACCTGGAG TGGCGCTAA
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Protein sequence | MSGRPPARKI PVGLSTASVW PQPAASAFES AAELGYDGVE VMVWADPVSQ DVAALGRLVE RSGVPVLAVH APCLLISQRV WSSDPVERLR RSVRAATELG APTVVLHPPF IWQRRYAEVF PALVAELEDQ TGIAIAVENM FPVRSGLGRG RSVAMTAFKP SIDPTDVGHR HYTLDLSHTA AAQMDALELA KRMGDGLTHV HLADGSGASK DEHMVPGRGN QPCAQLCEGL ASGGFAGQVV LEVNTRKARS TAERTEMLNE ALLFARLHLE WR
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