Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6576 |
Symbol | |
ID | 8330788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7722436 |
End bp | 7724058 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644947003 |
Product | protein of unknown function DUF690 |
Protein accession | YP_003104221 |
Protein GI | 256380561 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.373249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATCAA CACCCACCAC CAAGTCACAG GTCCAGGCGT ACCGCTTCGT GCTGCGCCGG ATGCAGTCAG CCCTGGTGCG CCGAGACGCC GTCATGCTGC ACGACCCGAT GCGCACGCAC TCACGTGCGA CCGCCGTCGG CGTGCTGCTC GGCGTCATCG GCCTCCTCGG CTTCATGGTC TACGGCTTCT TCTCGCCCGA CCCCCAGGTC GACGACCAGA CGCAGATCGC CATCAGCAAG GAGACCGGCC AGGTCTACGT GGTCCAGAAC AACCCCAAGG TCCTGGTCCC CATGACGAAC CTGGCGTCCG CGCGGCTGCT GCTGTTCCAG CAGTCCTCGC CGGACCAGTC CCAGGGGGCC GTGGGCGGCG GCGACGCGGC GGGCACGGGC GGCGGGGCCG CGGGCGGCGA GCCCAAGCTG GTGAGCGAGA AGGCGCTGGC CAAGCTGCCC AAGGGGCGGC TGACCGGCAT CCCGGACGGG CCGGACGTGC TGCCCGCCGA CCCGGCGGGC CGCATCGGCT CGGAGTGGTC GGTGTGCGAC CGGCTCGACC TGGACGACAC GCTCAACAAC CCCGCGTCCA AGGGCAAGTT CGAGACCACG GTCCTCGCGG GCGTCAGCGG CGGCGGTTCG CTGCTCGACG GCAACAAGGC GCTGCTGGTC AAGGCGGGCG CGGACGACGC GGCGACCTAC CTGGTCTACA AGGCGCCGGT GAACTCCAAG ATCACCTCCA CGAGCACCGT GCGGGCGAAG GTCGACCTGA CCAAGCCCGA GGTGCGCAAC GCGCTGAACC TGACCGGCAA GGAGCCCAGG GCGGTCAGCG TCGGCCTGCT CAACGCGATC CCCGAGGCGA AGGAGCTCGT CGCCCCGAAG ATCGAGAGCC AGGGCACCGC GATCGACTAC GTCACGGGCG AGAAGCTGAA GGTCGGCGAC GTCATCGAGG TCGAGCGCAC CGGTGAGAGC TCGGTGTTCT ACGTGGCGCT CAAGGACGGC CTGCAGGAGA TCAGCAAGGC GTCCGGCGAC CTGATCAGGG CGAGCCGCGA GCAGGGCTCC CCCAAGCCGG TCGACATCGC CAAGATCAAC GAGTCCCTGC GCCCGGCCAA CCCGCTCGAC CTGCTCGACT ACCCGAGCGA GGTCCCCGAC GTCCTGGTGC CCAACCAGAA CAACGTCGTG GTCTGCCTCG GGTGGAGCGC GAAGGACGTG AACGCGGGCA ACAAGTCGCA GCACACCCAG GTGACCATCG CGCCGTCGCT GCCCACGCAG AACACGTCGG TGCCGGTGCG GATCAACCAG GTGGGCGCGA CCGGCGAGGT CGTGGACTTC TTCGTCATGG CCTCCGGCAA GTCGGCCGTG GTCCGCTCGG CGACGTCCAC CCAGGACTTC GGCAGCGGCC CGATCCACAT CATCACCGGC CGGGGCGTGA AGTACGGCGT CCCGGACTCG GCGACGGCCG CCGCGCTCGG CCTCGGGCAG GACGGCTTCG CGCCGGGGCC CGAGTCGATC CTGCGGCTGC TGCCCAACGG GCCGCAGATG AACCGGAACG ACGCGTCGCG GAGCTGGGAC TCCATCCCGA CGGACAAGAG CCTCGGGACG CTTCCGGGGA GCAACCAGGC GGCGGGCGGC TGA
|
Protein sequence | MASTPTTKSQ VQAYRFVLRR MQSALVRRDA VMLHDPMRTH SRATAVGVLL GVIGLLGFMV YGFFSPDPQV DDQTQIAISK ETGQVYVVQN NPKVLVPMTN LASARLLLFQ QSSPDQSQGA VGGGDAAGTG GGAAGGEPKL VSEKALAKLP KGRLTGIPDG PDVLPADPAG RIGSEWSVCD RLDLDDTLNN PASKGKFETT VLAGVSGGGS LLDGNKALLV KAGADDAATY LVYKAPVNSK ITSTSTVRAK VDLTKPEVRN ALNLTGKEPR AVSVGLLNAI PEAKELVAPK IESQGTAIDY VTGEKLKVGD VIEVERTGES SVFYVALKDG LQEISKASGD LIRASREQGS PKPVDIAKIN ESLRPANPLD LLDYPSEVPD VLVPNQNNVV VCLGWSAKDV NAGNKSQHTQ VTIAPSLPTQ NTSVPVRINQ VGATGEVVDF FVMASGKSAV VRSATSTQDF GSGPIHIITG RGVKYGVPDS ATAAALGLGQ DGFAPGPESI LRLLPNGPQM NRNDASRSWD SIPTDKSLGT LPGSNQAAGG
|
| |