Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6493 |
Symbol | |
ID | 8330705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7627731 |
End bp | 7628345 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946922 |
Product | pentapeptide repeat protein |
Protein accession | YP_003104140 |
Protein GI | 256380480 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.364584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACAACC CGGAGATCGA ACTGGAGCAG GTCGTCGGCG CGGACTACGC CGACGCCGTG CTGTACGAGC AGGTGTGGGA GCGGAAGTCG TTCGTGGGCT GCGACTTCTC CGAGGCGGAC ATGCGCGGCC TGGTGACCAG GGGCTGCACG TTCACCGACT GCAAGTTCAC CCGCACCGAC CTCGGCGACT CCCGGCACAC CACCTCGGCG TTCCGCTCCT GCCGCTTCGA CCGCGCGGTG CTCGGCGGGG CCGAGTTCAC CTCCTGCTCG CTGCTCGGGT CGATGTTCGT CGACTGCTCG ATGCGGCCGA TCACCATCAC CGAGACCGAC CTGACCCTGG TGAGCCTCAG CGGCGCGGTC CTCCCCAAGG CCTCGCTGGC CGGTCTGCGG ATGCGCGAGG CGAACCTGGA GTCCGCGAAC CTCACCGGCG CCGACCTGCG CGGGGCCGAC CTGTCCGGGG CGCGGCTGAC CGGGACGAAG CTGGTGGACG CCGACCTGCG CGGGGCGCGG CTGGACGCGA ACGGGCTGGT GCAGGGCGTG CTGCGCGGGG CGAAGGTCGA CCTCGACACC GCCGTGGCCT TCGCCGCCGC GCACGGGTTG CTGGTGCGGT CCTGA
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Protein sequence | MDNPEIELEQ VVGADYADAV LYEQVWERKS FVGCDFSEAD MRGLVTRGCT FTDCKFTRTD LGDSRHTTSA FRSCRFDRAV LGGAEFTSCS LLGSMFVDCS MRPITITETD LTLVSLSGAV LPKASLAGLR MREANLESAN LTGADLRGAD LSGARLTGTK LVDADLRGAR LDANGLVQGV LRGAKVDLDT AVAFAAAHGL LVRS
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