| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6431 |
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| Symbol | |
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| ID | 8330642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7529075 |
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| End bp | 7534375 |
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| Gene Length | 5301 bp |
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| Protein Length | 1766 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644946859 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003104078 |
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| Protein GI | 256380418 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.903065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACG CCGACGACAA CCCCGTCGGC GGGGCCGTGC TGCTGGCCGG CGGGAAGGTC
ATGACCTGTG CGCACGTCGT CAACCACGCC CTCCGCCGCC ACGAGCGGGA AGCAGGCAAG
CCCGACGCGC CCGTCCGGCT CCAGTTCGGC CCGCGCACCG TCACCGCCCG CGTGGCCCAC
TGGATGCCCC CGCCCGCCCG CGAAGGCGAC CCCGGTGACG ACATCGCGGG CCTCGAGGTC
ACCCCGCCGC CCGACATCCC CCCGGCCCGC CTGATCACCA CCCTCCCCCG CCCCAACACC
GTCGTCCGGA TCTTCGGCTA CCCCGGCAAA CCCCTCCGCC CCGATGGCGC CTGGGTGGAC
GCCCTCGTCA AGGGCCGCAA CAGCCGAGGC CACCTCCAGC TGGAATCCAC CTCCGCCCTC
CGCGTCCAAC CCGGCTTCAG CGGCAGCCCC GTCTGGGACG ACGTCACCGG CCGCGTGGTC
GGCATCATCG CCACCGCGGG CACCTCCACC CCCGACAGCT ACGCCATCTC CGCCGAGCAG
CTCCGCGTCG GCTGGTCGGC GCTCGGCAGC AGTCGCACCG CCAAGCGCCC CGACACCGTC
ACCGCCCTGC ACCTCCCCGG CCCCCGCGCG GGCGGCAGGG GGTGGGCGTT CACCGCGTCC
GACCTGCTCC GCGACCTCCC CGCCGACACC CCGCCCGACC TCCTCGTCGT CGCGGGCGAC
CTCACCGAGC AGGGCGGCAA GGCCGAGTTC GCCCAAGCCT TCCGCCTCCT CGCCGACCTC
GCCGAGGACC TCGACCTCCC GCGCGACCGC GTGCTCGTCG TCCCCGGCGC CCACGACGTG
AACCGCAAGG CCTGCAAGGC CTACTTCGAC ACCGCCGAGG CCGACGACGA GGCCCCCGTC
CCCCCGTTCT GGCCCAAGTG GAAGCAGTTC TCCGCCGCCT TCGACCGGTT CTACGACGGC
CACTCCCCCA CCTTCACCGC CGACGAGCCC TGGACCCTCT TCGAGATCCC CGACCTCTCC
ACCGTCGTCG CCGGCTTCAA CTCCACCACC GCCGACACCC ACGAGCGCGC CACCACCAGC
CTCGGCCGCG ACCAGGTCGC CCGGTTCCGG ACGTGGCTCG ACGGGTTCCG CGAGCCCGAC
CGGTTGCGGC TCGGCGTGGT GCACGGGGAG AGCTCCGGGT CGGCCTGGCC GGACGAGCTG
CACCACCTCT TCTCGTCCCC CGCCGACAAC GACGGCTACC AGCTCGTCTC GTTCGACGCC
TCCCGCACCA CCCGCCAGGC CCGCCGCTTC GCCGACGGCC GCTGGACCGG CGACACCCGC
ATCAGCCCCA CCGGGACCGC ATGGCGCGTC ACCGAGCGCC GCCGCGCCGA ACCCGCCCAG
GAAAGCCCCC CGCCCCCGCC CGGCAACGCC TTCTTCGACC GCGTCGTGGA GGCCACCCGC
TTCGCGCACC CCGACGCGAG CACCGTGCCG CACCCGGAGA AGTCCTACCT GCGCGTCGGC
CTGCCCATCC CCGGCGGCGG CGTGGACTAC CGGCCGGTGG GCGTGGTCGA CGGGGACCTG
ACCGAGCGGG CCGTGGACGC GTTCGTCGTG GACGTGCACC GGCACTTCAC CGCCGAGGAC
CCCGGCACCC GCTCGGAGAT CGTCTACAGC GGTCGCCTCG CGTCGGCGGA CCTCGTGGGC
CGCGCGACCC GCCGGGGCGT GTCCCCGCGC AGCTGGGTCG AGTACCGGGG CCTGCTCGAC
CTCGGCCCGC TGGAGGAGCG CCTCAGGAAC GCGCTGGCCC GCGACAAGGT CTACCCCGAG
GCCCTGTACA CCGCGCAGCG CTACCGGGTC GTGGGCCGCC ACTCGTCCGG CGAGGTGGAA
CCGGACCTGC TCGCGCGGGT GCTCGACTGG CTCGGCCTGC GGGCGAGGCA GTTCGTGGTG
GTGCTGGGGG ACTTCGGGCG CGGCAAGTCG TTCCTGCTGC GGCAGCTGGC GCGCGCGCTG
CCCGAGCACC TGGGCGGGGT GACGCCGCTG CTGGTGGAGC TGCGGTCGCT GCAGAAGGCC
CCGACGCTCA ACCAGCTGCT GGCGAACGCG CTGGTGGGCC AGGGCGTGGC CGTGGTCGAC
GTGGACAAGC TCCGGTACAT GATCGCCAGC GGCCGGGTCG CGCTGCTGTT CGACGGGTTC
GACGAGCTGG AGCTGCGGGT CGGCTACGAC AACGCCGCCG ACTACCTGCG CACCCTGCTG
GAGGTGGTCG GCGGCGAGGC GAAGGTCGTG CTGACCAGCC GCACCCAGCA CTTCCGCTCG
GCCGCGCAGG TGCTGACGGC GCTGGGCGAC GAGGTCGTGG CGACCGGGGC GAGCCGGGTG
GTGGAGCTGG AGGACTTCAC CCGCGAGCAG ATCGTGGAGT TCCTGACCAA GCGGTACGGC
GGCGACCACG AGCGGGCGCG GGCGCGGTTG CGGCTGCTGG ACGAGGTCCA GGACCTGCTG
GGGCTGTCGC GGAACCCCCG GATGCTGTCG TTCATCGCGG AGCTGGAGGA GGACCGGCTG
CGGGAGGTGC AGCAGCGCAA GGGGACGATC AGCGCGGCGG ACCTGTACCA GGAGCTGGTG
GACTCGTGGC TGCTGCACGA GCAGGCCCGC CAGCAGCACC GGCACGGGCT TCCGGTGCTG
GGCAAGGACG AGCGGCTGCG GGTGTGCACG GACCTGGCGA CGCGGTTGTG GTCGACGGGC
GCGAACGCGA TCCAGGAGGA CGAGCTGGGC GTGGTCGCGG TGGCGGCGCT GACCGAGGTG
GCGGACCTGG GGTACACGCA GGACCAGGTG GCGCACGCGA TCGGCTCGGG GACGCTGCTG
GTGACGGGCG AGAGCGGCTT CGGGTTCGTG CACCGGTCGG TGATGGAGTG GCTGGTGGCG
AACGAGGCGG CGCGGCGGTT GCGGGCCGGG GAGGGGGTGG GGGAGGTCGC GGGGCGGGCG
ATGTCGCGGC TGATGGTGGA CTTCCTGTGC GACCTGGCCG GGCACGCGCG GGCGCGGCGG
TGGGCCCTGG CGGTGTCGGT CGACGGGCTG GCGAGCGCGG AGGAGAAGCA GAACGCGCTG
CTGGTGGTCG ACCGGTTGGG CGGGAGCGGG TTGGGCGACC TGAGCGAGCT GGACCTGCGG
AAGGCCGACC TGTCGCGGCT GGACCTGCGG GGGACGCGCC TGGTGGGCTC GGACCTGCGC
GGGCAGCGGG TCGACGGGGC CGTGCTGCGC GGGGTCGACC TGACCGGGGC GGACCTGCGG
GGCGCCCGCG TCACCGGCGG CGACCTGTCG GAGGCGGTGC TGACCGGGAG CCGCTGGGAG
GGCGCGGCGC TGCTCGGGGT GGCCGGGACC GAGCGGCGCC CGGAGCTGCG CGTGGCGGCG
GTGAGCGGCC GGGACCGGGC CGAGGTGATG CTGGCGCGCA GCGGGCCCGT GCTCGCGGTG
GCCTACTCGC CGGACGGCGA GCGGATCGCG CTGGCGCACG GCAGGCAGGT GGAGCTGCTG
AACGCGGCGG GCCACTCGTC GCTGCGCTTC GTCGGCGAGC ACGGCGGCAA GGTCACCTCG
GTGGCGTTCT CCCCGGACGG GACCCGCCTG GTGACCGGCG GCGAGGACGG GACGGCGCGG
GTGTGGACCA CCGACGGCGA CCACGTCCTG ACCCTCACCG GCCACGAGCG CACGGTCACC
GCCGTCGCCT TCTTCCCGGA CGGGAGGCGG ATCGCCACCG GCAGCCGGGA CGGCACCACC
CGCACCTGGA CCTCGGCGGG CGAGCCGCTC CGCGTCCTCA CCAGCGACTC CAGGCCGATC
ACCGCCCTCG CGCTCGCCCC GGACGGCAGG CGCCTCGCCA CCGGCAGCAG CGCGGGCACC
GCGCACGTGT GGACGGCGGG CGGAGAGCAC GTCGCGGAGC TGGCGGGCCA CGAGAACTGG
ATCAACGCCG TGGCCTTCTC CCCCGACGGC GCCCGCGTCA CCACCGCCAG CAGCGACCGG
ACCGCGCGCA CCTGGACCAC CGACGGCACC CAGGTCGCCG TCCTCACCGA CGACGTCGGC
CCCGTGACCG CGCTCGCCCA CTCCCCCGAC GGCAAGCACG TCGCCACCGG GGCCAGCGAC
GGCACCGGGC ACGTCTGGAC CGCCGACGGC TCCCTCGTCG CCACCCTCCT CGGCCACCAG
GGCGTGATCA CCTCGATCGC CTACTCGCCG GACGGCGCGA TCATCACGAC CGCGGGCAGC
GACAAGACCG CCCGCACCTG GAACGCGGAC GGCGGCCTGG TCGCCATCCC GACCACCCGC
TCCCGGACCG TCACCTCCGC CGCCTTCGCG CCGAACGGCC GGTTCCTGGC CACCGCCAGC
AGCGACGGCG CGACGCGGGT GTGGACGCGG GAGGGGGTGC TGGTGACCAC CGTGCACGGG
GACGGGAACC GGGTGAACGC GGTCGCGTTC TCCCCCGGCA GCCACCGCAT CGCCACGGCG
GGCCACGACG GCACCGCGCA CGTCTGGGCG GGCGACGGCT CCAGCACCGC CACCCTCGTC
GGCCACGAGC ACCGGGTCAA CGCGGTGGCG TTCTCCCCGA ACGGCGAGCT GATCGCCACC
GCGGGCAGCG ACCAGACCGC GCGGTTGTGG GACTCGGAGG GCAGTGCGCG CGCCGTCCTC
ACCGGGCACC GGAACTGGGT CACCTCCGTC GTGTTCTCCC CGGACGGCGA GCTGGTCGCG
ACCGCCAGCC ACGACGGCAC CGCGCGGATC TGGTCGGTCG ACGGCGAGCC GGTGACGGAC
TTCGTCAAGC ACCCCAGGCC GGTCACCTCG GTCGCGTTCT CCCCGGACAG CGGGACCATC
GCCACCGGCG GCAACGACGG CACGGCGCGC CTGTGGACCG TCGAGGGCGG CCTGCTCAGG
TCCCTGCCGA GGCACCGGGG CCGGGTCACC GCCGTCGCCT TCTCCCCGAA CGGCGCGCAC
GTCGCCACCG CGGGCAGCGA GGGCGACGCG CACGTGCTGG GCCTGGACGG GACGGTGCGC
GCCGTCCTGA GCGGGCACAG CGAGAGCGTC ATGACCGTCG CGTTCTCCCC GCGCGGCAAC
CACCTCGCCA CCGGTTCCGT CGACGGCACC ACCCGCCTGT GGACCGCCGA CGGCGCCCTC
GTCGCCACGC TCATCGCCAC CGACGACGGC TGGGCAACCC TGTTCCCCGA CGGCTCCTAC
AAGCACGGCG GCGACGTCGG CGCTTTCCTG TGGTGGGCCA TCAAGTCCTG CCGGTTCGAG
GTCGGCGAGC TGGACCACCA CTACCCCGAG ATCCGGCGGC TGCCTCACAG CGCCCCCATG
CCCCCGCCGC TAACCTCGTG A
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| Protein sequence | MLDADDNPVG GAVLLAGGKV MTCAHVVNHA LRRHEREAGK PDAPVRLQFG PRTVTARVAH
WMPPPAREGD PGDDIAGLEV TPPPDIPPAR LITTLPRPNT VVRIFGYPGK PLRPDGAWVD
ALVKGRNSRG HLQLESTSAL RVQPGFSGSP VWDDVTGRVV GIIATAGTST PDSYAISAEQ
LRVGWSALGS SRTAKRPDTV TALHLPGPRA GGRGWAFTAS DLLRDLPADT PPDLLVVAGD
LTEQGGKAEF AQAFRLLADL AEDLDLPRDR VLVVPGAHDV NRKACKAYFD TAEADDEAPV
PPFWPKWKQF SAAFDRFYDG HSPTFTADEP WTLFEIPDLS TVVAGFNSTT ADTHERATTS
LGRDQVARFR TWLDGFREPD RLRLGVVHGE SSGSAWPDEL HHLFSSPADN DGYQLVSFDA
SRTTRQARRF ADGRWTGDTR ISPTGTAWRV TERRRAEPAQ ESPPPPPGNA FFDRVVEATR
FAHPDASTVP HPEKSYLRVG LPIPGGGVDY RPVGVVDGDL TERAVDAFVV DVHRHFTAED
PGTRSEIVYS GRLASADLVG RATRRGVSPR SWVEYRGLLD LGPLEERLRN ALARDKVYPE
ALYTAQRYRV VGRHSSGEVE PDLLARVLDW LGLRARQFVV VLGDFGRGKS FLLRQLARAL
PEHLGGVTPL LVELRSLQKA PTLNQLLANA LVGQGVAVVD VDKLRYMIAS GRVALLFDGF
DELELRVGYD NAADYLRTLL EVVGGEAKVV LTSRTQHFRS AAQVLTALGD EVVATGASRV
VELEDFTREQ IVEFLTKRYG GDHERARARL RLLDEVQDLL GLSRNPRMLS FIAELEEDRL
REVQQRKGTI SAADLYQELV DSWLLHEQAR QQHRHGLPVL GKDERLRVCT DLATRLWSTG
ANAIQEDELG VVAVAALTEV ADLGYTQDQV AHAIGSGTLL VTGESGFGFV HRSVMEWLVA
NEAARRLRAG EGVGEVAGRA MSRLMVDFLC DLAGHARARR WALAVSVDGL ASAEEKQNAL
LVVDRLGGSG LGDLSELDLR KADLSRLDLR GTRLVGSDLR GQRVDGAVLR GVDLTGADLR
GARVTGGDLS EAVLTGSRWE GAALLGVAGT ERRPELRVAA VSGRDRAEVM LARSGPVLAV
AYSPDGERIA LAHGRQVELL NAAGHSSLRF VGEHGGKVTS VAFSPDGTRL VTGGEDGTAR
VWTTDGDHVL TLTGHERTVT AVAFFPDGRR IATGSRDGTT RTWTSAGEPL RVLTSDSRPI
TALALAPDGR RLATGSSAGT AHVWTAGGEH VAELAGHENW INAVAFSPDG ARVTTASSDR
TARTWTTDGT QVAVLTDDVG PVTALAHSPD GKHVATGASD GTGHVWTADG SLVATLLGHQ
GVITSIAYSP DGAIITTAGS DKTARTWNAD GGLVAIPTTR SRTVTSAAFA PNGRFLATAS
SDGATRVWTR EGVLVTTVHG DGNRVNAVAF SPGSHRIATA GHDGTAHVWA GDGSSTATLV
GHEHRVNAVA FSPNGELIAT AGSDQTARLW DSEGSARAVL TGHRNWVTSV VFSPDGELVA
TASHDGTARI WSVDGEPVTD FVKHPRPVTS VAFSPDSGTI ATGGNDGTAR LWTVEGGLLR
SLPRHRGRVT AVAFSPNGAH VATAGSEGDA HVLGLDGTVR AVLSGHSESV MTVAFSPRGN
HLATGSVDGT TRLWTADGAL VATLIATDDG WATLFPDGSY KHGGDVGAFL WWAIKSCRFE
VGELDHHYPE IRRLPHSAPM PPPLTS
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