Gene Amir_6411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6411 
Symbol 
ID8330622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7505482 
End bp7507221 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content73% 
IMG OID644946839 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003104058 
Protein GI256380398 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACGC GCAACCCGTC ACGAACCTCC GCAACGGGCA GGCTCGGTCC CGAGGACCGG 
GAGCGGTCGT GGCGCAGGCT CGGTGAGGAG ACCTTCGACC TGGTGATCGT CGGCGGCGGC
GTGGTCGGCG TCGGCGCGGC CCTGGACGCC GCGACCAGGG GCCTGAAGGT CGCCCTGGTG
GAGGCCCGCG ACCTCGCGTC GGGCACGTCG AGCCGGTCGA GCAAGCTCTT CCACGGCGGC
CTGCGCTACC TGGAGCAGTT GGAGTTCGGC CTGGTCAGGG AGGCGCTGCG CGAGCGGGAG
CTGATGCTCA CCAAGATCGC GCCGCACCTG GTCAAGCCGG TGAGCTTCCT GTACCCGCTG
ACGAACCGGG TGTGGGAGCG GCCGTACACC GCCGCCGGGC TGCTGATGTA CGACACCATG
GGCGGCGCGC GCTCGGTGCC CGGCCAGAAG CACCTGAGCC GCTCGGGCGC GCTGCGGCTG
GCGCCCTCGC TCAAGCAGGA CGCGCTGATC GGCGGCATCC GCTACTTCGA CGCGCAGGCC
GACGACGCGC GGCACACCAT GATGGTCGGG CGCACCGCCG CCCACTACGG CGCGGTCGTG
CGACCGTCGA CGCAGGTCAT CGACTTCCTG CACGAGTCGG ACCGGGTGTC CGGCGTGCGG
GTGCGCGACG TGGAGGACGG GCGGGAGACC GACGTCCGGG CGCACGCGGT GATCAACGCG
ACCGGCGTGT GGACCGACGA GCTGCAGCGG CTGTCCGGCA GCCGGGGCCG GTTCCGGGTG
CGGGCCAGCA AGGGCGTGCA CATCGTGGTG CCCAGGGACC GGATCGTGTC CGAGACCGGG
CTGATCCTGC GCACCGAGAA GTCCGTGCTG TTCGTGATCC CGTGGCGCAA CCACTGGATC
ATCGGCACCA CCGACACGGA CTGGAACCTG GACCTGTCGC ACCCGGCCGC CACCAAGGCC
GACATCGACT ACCTGCTCGC CCAGGTCAAC AGCGTGCTGG CGACGCCGCT GGCGCACGAG
GACATCGAGG GCGTGTACGC GGGCCTGCGG CCACTGCTGG CCGGGGAGAG CGAGTCCACG
TCGAAGCTGT CGCGCGAGCA CGCGGTGGCG CGGGTCGCGC CCGGCCTGGT CGCGATCGCG
GGCGGCAAGT ACACCACCTA CCGGGTGATG GGCGCGGACG CGGTGAACGC GGCGTCGGTC
GACCTGCCCG GCCGCATCCA GCCGTCGATC ACCGACAAGG TGCCGCTGGT GGGCGCGGAC
GGGTACCACG CGCTGGTGAA CCAGGCCGAC CACCTGGCGG CCGAGCACGG CCTGCACCCG
TACCGGGTGC GGCACCTGCT GGACCGGTAC GGCTCGCTGG TGCACGAGGT GCTGGCGCTG
GCCGCGGACT CGCCGGAGCT GCTCAAGCCG ATCCCCGGTT CGCCGGACTA CCTCCAGGTC
GAGGTGGTGT ACGCGGCCTC GCACGAGGGC GCGCTGCACC TGGAGGACGT GCTGACCAGG
CGCACCCGGA TCTCGATCGA GTACCCGCAC CGGGGCGTCG AGTCGGCCGA GGCCGTGGCC
GGGCTGATGG CCGGGGTGCT GGGCTGGGAC GAGGCCGCGA TCGCGCGCGA GGTCGAGGTG
TACACGGCGC GCGTGGAGGC CGAGCGGGCC TCGCAGGACG AGCCGAGCGA CCAGGCCGCC
GACGCGGTGC GGGCGGCGGC GCCGGAGGTG CGGCCGGAGC TGGTCGAGCC GGTGTCCTGA
 
Protein sequence
MATRNPSRTS ATGRLGPEDR ERSWRRLGEE TFDLVIVGGG VVGVGAALDA ATRGLKVALV 
EARDLASGTS SRSSKLFHGG LRYLEQLEFG LVREALRERE LMLTKIAPHL VKPVSFLYPL
TNRVWERPYT AAGLLMYDTM GGARSVPGQK HLSRSGALRL APSLKQDALI GGIRYFDAQA
DDARHTMMVG RTAAHYGAVV RPSTQVIDFL HESDRVSGVR VRDVEDGRET DVRAHAVINA
TGVWTDELQR LSGSRGRFRV RASKGVHIVV PRDRIVSETG LILRTEKSVL FVIPWRNHWI
IGTTDTDWNL DLSHPAATKA DIDYLLAQVN SVLATPLAHE DIEGVYAGLR PLLAGESEST
SKLSREHAVA RVAPGLVAIA GGKYTTYRVM GADAVNAASV DLPGRIQPSI TDKVPLVGAD
GYHALVNQAD HLAAEHGLHP YRVRHLLDRY GSLVHEVLAL AADSPELLKP IPGSPDYLQV
EVVYAASHEG ALHLEDVLTR RTRISIEYPH RGVESAEAVA GLMAGVLGWD EAAIAREVEV
YTARVEAERA SQDEPSDQAA DAVRAAAPEV RPELVEPVS