Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6250 |
Symbol | |
ID | 8330461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7329173 |
End bp | 7330546 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644946681 |
Product | ABC transporter related |
Protein accession | YP_003103900 |
Protein GI | 256380240 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACGACG GCAGTGGCCG CATCGTGGTG CAGGGCTTGA CCAAGCAGTT CGGTCCGGTC GCGGCGGTGC AGAACTTGAG CTTCACGGTG GAACCGGGTT CGGTGACCGG CTTCCTCGGC CCCAACGGGG CCGGAAAGAC TACGACGTTG CGCATGTTGC TCGGCCTGGT GACGCCCACG GCGGGCACCG CGCTGATCAA CGGCAGGCCC TTCACCGAGC TGGGGAACCC CGGCCGCGTG GTGGGCGCGG TGCTGGAGGC GCAGGGCGTC CACCCGTCGC GGACGGCCCG CAACCACCTG CGGGTGTACG CGGCGGCGAT GGGCGTGCCC GACCAGCGGG CCGACCAGGT GCTCCAGCTC GTCGGGCTGG GCGCGGCGGC CGACCGCAAG GCAGGCGGCT TCTCGCTCGG CATGAAGCAG CGGCTGGCCC TGGCCACCGC GCTGCTCGGC GACCCGCAGA TCCTGGTGCT GGACGAGCCC GCGAACGGCC TCGACCCCGA GGGCATCGCC TGGCTGCGCC AGTTCCTCCA GTCGTACGCG CGCAGCGGTC GCACGGTGCT GATCTCCAGC CACCTGCTGG CCGAGGTCGA GCAGACGGTC GACCAGGTGG TGATCGTCAG CCGGGGCCAG ACCATGTACT ACGGGTCGCT GGACCAGCTG CGCGGCTCCC AGCAGAACCG GGTGCTGGTG CAGCCGTCCG ACCCGGCGGC GCTGGTCGCG GCGCTGCAGG CGGACGGGCT GTCGGCGATC GAGCAGACCC CGGACGGCCG GATCGCGGTC AGCGGGGCCG AGCCGAAGCA CATCGCGGAC GTCGCGCTGA AGGCGGGCGT GTCGGTGTAC GGCATCCAGG AGGAACGGGT CGACCTGGAG CGGCTGTTCT TCCAGCTGAC GAGCGGCCAG TACACGGGCG CGCCGATGCC GGGCTACCAG GCGCCGCCTC CGGGCTTCGC CCAGGCCTAC CAGCAGCAGC CGCCGCAGCA GACCGGCTAC CACACCCCGC CCCCCGGCTA CCCGGCCCAG CCGGGCTACC CGCAGCAGCC CCAGCAGGGC TACCAGGGGC AGCCGGGCTA CGACCCGCAG CAGGCGTACC AGCAGCAGGC CCCGCAGGGG TACCCGCAGC AGCCGCCGCA GGGCTACCAG CAGCAGCCGG GCTTCGACCC GCAGCAGCAG GGCTACCAGC AGCAGCCGCC GCAGGGGTAC GACCCGCAGC AGCAGGCGTA CCAGCAGCAG GGCTACCAGC AGCCGACGTC GGGCCAGTTC CCGGCCGCGC CGGACCACCA GGCGCCGCCG ACCCCCGACT CGCCGTACGC GCCGCCGCCC GGCGGCAACC AGCAGGGTCA GCAGGGGCAG AGCGGTCTCG GGGGCGGTGC GTGA
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Protein sequence | MHDGSGRIVV QGLTKQFGPV AAVQNLSFTV EPGSVTGFLG PNGAGKTTTL RMLLGLVTPT AGTALINGRP FTELGNPGRV VGAVLEAQGV HPSRTARNHL RVYAAAMGVP DQRADQVLQL VGLGAAADRK AGGFSLGMKQ RLALATALLG DPQILVLDEP ANGLDPEGIA WLRQFLQSYA RSGRTVLISS HLLAEVEQTV DQVVIVSRGQ TMYYGSLDQL RGSQQNRVLV QPSDPAALVA ALQADGLSAI EQTPDGRIAV SGAEPKHIAD VALKAGVSVY GIQEERVDLE RLFFQLTSGQ YTGAPMPGYQ APPPGFAQAY QQQPPQQTGY HTPPPGYPAQ PGYPQQPQQG YQGQPGYDPQ QAYQQQAPQG YPQQPPQGYQ QQPGFDPQQQ GYQQQPPQGY DPQQQAYQQQ GYQQPTSGQF PAAPDHQAPP TPDSPYAPPP GGNQQGQQGQ SGLGGGA
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