| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5914 |
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| Symbol | |
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| ID | 8330121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6958093 |
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| End bp | 6959070 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946346 |
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| Product | integrase family protein |
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| Protein accession | YP_003103569 |
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| Protein GI | 256379909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000658468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCCCGC CTCCGCACCG CCGTCCGCGC CGCGTCGACC TCGTCCGGCT CCGCCGCGAA
CTGCCGTCCG ACGTCGCCAC CGCGCTCGAC GCCTACGAGC GCCACCTGTC GCTGGAGCGC
GGCCTGTCCC CGCACACCGT CCGCGCCTAC CTCGGCGACG CGGTCGCGCT GCTCGTCCAC
CTCGCCGCCG GGACGCCGGG GGACGCGACG GTCGAGTCGG TGGACCTGCT CGGCCTGCGC
TCGTGGCTCG CCGCGCAGCA CGCCGAGGGG GCGAGCCGGA CGACCATGGC GAGGCGCGCC
GCGTCGGCCA GGGCGCTCAC CGCGTGGGCC GCCCGCACGG GCCTGCTGGC GGAGGACCCC
GGTCCCCGGC TGAACGCCCC GCGCCCCCAC CGGACCCTGC CGGTGGTGGT CCGCCCGGAC
CAGGCAGGGG CGGCGCTGGA GGCCGCCGCG GCGGGCGCGG ACCAGCACGA TCCGGTTGCG
CTCCGTGACC GGGCCGTGGT GGAGTTGCTG TACGCGTCGG GGGTCCGGGT AGCGGAGTTG
TGCGGGCTCG ACCTCGACGA CGTGGACTAC TCCCAAAGGG TGATTCGAGT TCTGGGCAAA
GGCAGTCGCG AACGCACTGT TCCCTTCGGC GTCCCGGCCG AACGGGCAGT TCGTCAATGG
GCGGACCTGG GAAGATCCGC CCTGGTCACG GAGCGTTCGC ATCGAGCCCT GTTCCTCGGC
GCCCGAGGCG GGAGGCTCGA CCCGCGTACC GCCAGGAGGG TCGTCCACGA TGTCATGGGT
GCGGTCCCCG GCTCGGCTGA CGTCGGCCCG CACGGCCTGC GCCACTCCGC GGCCACGCAC
CTGCTGGAAG GGGGAGCCGA TCTGCGCACC GTCCAAGAGC TCCTTGGTCA CGCTACGCTC
GCAACGACTC AGCTCTACAC ACACGTCACC GTCGAACGGC TGAAGGCAAT CCATGATCGA
ACCCACCCCC GCTCCTGA
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| Protein sequence | MSPPPHRRPR RVDLVRLRRE LPSDVATALD AYERHLSLER GLSPHTVRAY LGDAVALLVH
LAAGTPGDAT VESVDLLGLR SWLAAQHAEG ASRTTMARRA ASARALTAWA ARTGLLAEDP
GPRLNAPRPH RTLPVVVRPD QAGAALEAAA AGADQHDPVA LRDRAVVELL YASGVRVAEL
CGLDLDDVDY SQRVIRVLGK GSRERTVPFG VPAERAVRQW ADLGRSALVT ERSHRALFLG
ARGGRLDPRT ARRVVHDVMG AVPGSADVGP HGLRHSAATH LLEGGADLRT VQELLGHATL
ATTQLYTHVT VERLKAIHDR THPRS
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