| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5060 |
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| Symbol | |
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| ID | 8329258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6022232 |
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| End bp | 6023440 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945496 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003102728 |
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| Protein GI | 256379068 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000550231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACCA TCGAGCGCGC CGAGGTCCTG ATCGCCTCGC CGGGGCGCAA CTTCGTCACC
CTCCGCATCA CCACCTCCGA CGGCGTAACC GGCCTGGGCG ACGCCACCCT CAACGGCCGG
GAACTCGCCG TCGCCTCCTA CCTCCGCGAC CACGTCGTCC CCCTCCTCAT CGGCCGCGAC
CCCGCCCGTA TCGAGGACAC CTGGCAGTAC CTCTACCGAG GCGCCTACTG GCGTCGCGGC
CCGGTCACCA TGACCGCCAT CGCCGCCGTC GACACCGCCC TCTGGGACAT CAAGGGCAAG
GTCGCCGACC TCCCCGTCTA CCAGCTCCTC GGCGGCCGTT CCCGCGACGG CGTCATGGTC
TACTCCCACG CCAGCGGTGC CGACACCGCC GAGCTGCTCG ACGACGTCGC CCGCTTCCTC
GACCTCGGCT ACCTCGCCGT CCGAGCCCAG GCCGCCGTCC CGAACGTCAA GGGCACCTAC
GGCGTCCGCA AGGGCGCCGT CTACGAGCCC GCCGCGACCG CGCTCCCCGA CGAGCAGCCC
TGGAACACCC CCGCCTACCT CGACTTCGCC CCCACCTACC TCGCCGCCGT CCGCGAGCGC
TTCGGCTTCG GCTTCCACCT CCTCCACGAC GTCCACCACC GCCTCACCCC CATCGAGGCC
GCCCGGTTCG GCAAGTCGGT CGAGGACCTG CGGCTGTTCT GGATGGAGGA CCCGACGCCC
GCCGAGAACC AGGAGGCGTT CCGGCTCATC CGCCGGCACA CCACCACCCC GATCGCCGTC
GGCGAGAACC TCAGCTCCAT CTGGGACGTC CAGCACCTCA TCACCGAGCA GCTGATCGAC
TACGTCCGCA CCACCGTCGT CCACGCGGGC GGCATCACGC ACCTGCGCCG CATCTTCGAC
CTCGCCGCCC TCTACCAGGT CCGCACCGGC TCGCACGGCG CCACCGACCT GTCCCCGGTG
AGCATGGCCG CCGCCGTGCA CGTCGACATC TCGGTGCCGA ACTTCGGCAT CCAGGAGCAC
ATGGGCCACA CCCCCGAGGT CGCCGAGGTC TTCCGCAGCG ACGTCCGCTT CGAGAACGGG
ATGCTCCACC CCTCGGACGC CCCCGGCCTC GGCGTCGAGT ACGACGACGA CGCCGCCGCC
CGCTTCCCGT ACGACCCCCG CTACCTGCCC GTCGCGCGCC TCGCCGACGG CTCGATGCAC
GACTGGTGA
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| Protein sequence | MSTIERAEVL IASPGRNFVT LRITTSDGVT GLGDATLNGR ELAVASYLRD HVVPLLIGRD
PARIEDTWQY LYRGAYWRRG PVTMTAIAAV DTALWDIKGK VADLPVYQLL GGRSRDGVMV
YSHASGADTA ELLDDVARFL DLGYLAVRAQ AAVPNVKGTY GVRKGAVYEP AATALPDEQP
WNTPAYLDFA PTYLAAVRER FGFGFHLLHD VHHRLTPIEA ARFGKSVEDL RLFWMEDPTP
AENQEAFRLI RRHTTTPIAV GENLSSIWDV QHLITEQLID YVRTTVVHAG GITHLRRIFD
LAALYQVRTG SHGATDLSPV SMAAAVHVDI SVPNFGIQEH MGHTPEVAEV FRSDVRFENG
MLHPSDAPGL GVEYDDDAAA RFPYDPRYLP VARLADGSMH DW
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