Gene Amir_4904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4904 
Symbol 
ID8329102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5842070 
End bp5842849 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content75% 
IMG OID644945344 
ProductABC transporter related 
Protein accessionYP_003102576 
Protein GI256378916 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA CGCTGCGCGC CGAGGAGCTG GTGGTGCGCT TCGGCGGCCA CGCGGCCGTG 
GACGGGGTCG GGCTGACCGT GCCGACCGGG TCGGTGACCG CGGTCGTGGG GCCCAACGGG
TGCGGCAAGT CCACCTTGCT GCGCGCCCTC TCCCGCTTGC TGCCAACGGA TTCCGGCCGG
GTGCTGCTGG ACGGCGAGGA CGTGCGCCGA ACCCCGCCGC GCGCGTTCGC CCGCAAGGTC
GCCCTGCTGC CGCAGGAACC GCAGGCGCCG GACGGGCTGA CCGTGGTGGA CCTGGTGACG
CGCGGCCGCG ACCCGCACCG CCGCTGGTAC GACCAGTGGT CGAGGCCGGA CGAGGAGATC
GTGCTGGACG CGTTGCGCCG CACGGGTCTG GCGGAGCTGG CGGACCGGCC GCTGCACACC
CTGTCGGGCG GGCAGCGGCA GCGGGCGTGG ATCGCGCTGG CGCTGGCGCA GCGCACCGAC
GTGCTGCTGC TGGACGAGCC GACGAACCAC CTGGACGTGG CGCACCAGCT GGACGTGCTG
GACACGGTGA CCTCGTTGCG GGGCTTGACG GTGGTGATGG TCCTGCACGA CCTCGGCCTG
GCCGCCCGGT ACGCCGAGCG CGTGGTGGCG ATGCGCGACG GCCGGGTCGT GGCGTCCGGT
CCGGTGGCGC GGGTGCTCAC GCCGCCGCTG CTGCGGGAGG TGTTCGACGT GGAGTGCGGC
GTGCTGACCG ACCCGGAGAC GGGGCGGCCG GTGGTGGTGC CGAGGCGGGT GGTGCGCTGA
 
Protein sequence
MSTTLRAEEL VVRFGGHAAV DGVGLTVPTG SVTAVVGPNG CGKSTLLRAL SRLLPTDSGR 
VLLDGEDVRR TPPRAFARKV ALLPQEPQAP DGLTVVDLVT RGRDPHRRWY DQWSRPDEEI
VLDALRRTGL AELADRPLHT LSGGQRQRAW IALALAQRTD VLLLDEPTNH LDVAHQLDVL
DTVTSLRGLT VVMVLHDLGL AARYAERVVA MRDGRVVASG PVARVLTPPL LREVFDVECG
VLTDPETGRP VVVPRRVVR