Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4904 |
Symbol | |
ID | 8329102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5842070 |
End bp | 5842849 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945344 |
Product | ABC transporter related |
Protein accession | YP_003102576 |
Protein GI | 256378916 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACGA CGCTGCGCGC CGAGGAGCTG GTGGTGCGCT TCGGCGGCCA CGCGGCCGTG GACGGGGTCG GGCTGACCGT GCCGACCGGG TCGGTGACCG CGGTCGTGGG GCCCAACGGG TGCGGCAAGT CCACCTTGCT GCGCGCCCTC TCCCGCTTGC TGCCAACGGA TTCCGGCCGG GTGCTGCTGG ACGGCGAGGA CGTGCGCCGA ACCCCGCCGC GCGCGTTCGC CCGCAAGGTC GCCCTGCTGC CGCAGGAACC GCAGGCGCCG GACGGGCTGA CCGTGGTGGA CCTGGTGACG CGCGGCCGCG ACCCGCACCG CCGCTGGTAC GACCAGTGGT CGAGGCCGGA CGAGGAGATC GTGCTGGACG CGTTGCGCCG CACGGGTCTG GCGGAGCTGG CGGACCGGCC GCTGCACACC CTGTCGGGCG GGCAGCGGCA GCGGGCGTGG ATCGCGCTGG CGCTGGCGCA GCGCACCGAC GTGCTGCTGC TGGACGAGCC GACGAACCAC CTGGACGTGG CGCACCAGCT GGACGTGCTG GACACGGTGA CCTCGTTGCG GGGCTTGACG GTGGTGATGG TCCTGCACGA CCTCGGCCTG GCCGCCCGGT ACGCCGAGCG CGTGGTGGCG ATGCGCGACG GCCGGGTCGT GGCGTCCGGT CCGGTGGCGC GGGTGCTCAC GCCGCCGCTG CTGCGGGAGG TGTTCGACGT GGAGTGCGGC GTGCTGACCG ACCCGGAGAC GGGGCGGCCG GTGGTGGTGC CGAGGCGGGT GGTGCGCTGA
|
Protein sequence | MSTTLRAEEL VVRFGGHAAV DGVGLTVPTG SVTAVVGPNG CGKSTLLRAL SRLLPTDSGR VLLDGEDVRR TPPRAFARKV ALLPQEPQAP DGLTVVDLVT RGRDPHRRWY DQWSRPDEEI VLDALRRTGL AELADRPLHT LSGGQRQRAW IALALAQRTD VLLLDEPTNH LDVAHQLDVL DTVTSLRGLT VVMVLHDLGL AARYAERVVA MRDGRVVASG PVARVLTPPL LREVFDVECG VLTDPETGRP VVVPRRVVR
|
| |