| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4888 |
|---|
| Symbol | |
|---|
| ID | 8329086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5827032 |
|---|
| End bp | 5828063 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644945328 |
|---|
| Product | NMT1/THI5 like domain protein |
|---|
| Protein accession | YP_003102560 |
|---|
| Protein GI | 256378900 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCT CCACCCTGTC CCGCCGCCGC TTCGGCGCCC TGACCGCCGT GGTGGCCACC
GCCGCCGCGC TGGTCGCGTG CAGCCCCGCC GACGCGGGCT CGTCCTCGTC CTCGGGCGAG
GGCGGCACCA AGAAGGTCAC CATGCAGATC GACGGCTCGG CGGTGCCGTA CTACGCCCCG
CTGTACGCCG CGCAGAAGCA GGGCTTCTTC AAGAACCACG GCCTGGAGGT GGAGTTCACC
TACGCCCAGG GCGCCGACAT CGTGCAGAAC GTCGCCGCGG GCAACGTGGA CTTCGGCTTC
CCCAACGGCG ACTCGGTGAT CACCGCGTAC GCCAAGGGCA TCAAGACCAA CGTCGTGCAC
ACCACGTACC AGCAGGGCAT CGGCGCGCTG CTGTTCCGCG ACGACTCCGG CATCAAGACC
CCGGCGGACC TCAAGGGCCG CAAGGTCGGC GTGACCGACC TGGGCAGCGC GAACTACGCG
CAGCTCCAGG CGATGCTGGC CAAGGAGAAC GTGCCGCTGT CCGAGGTGCA GGTCGAGACC
ATCGGCACCG GCGCGATCGT GGACGCCATG AAGAACGGCC AGGTCGACGC GATCGTCTTC
TCCCGGCTGC GCTACTACGC GCTGCTCCAG GCCGGGGTGG GCGTCGGCCA GGTGCTGAGC
GACGAGTACC TGCCGTCGTT CGGCAACATC GTCATCGCGA ACCCGGAGAA GGTGAACTCC
GACGCCGAGA CGGTGAAGTC GTTCAACGCG GCCCTGAACG AGGGCATCCA GTACGTGATC
GACAACGTCG GCGAGGCCAC CAGGATGGCC ATCAAGGACT ACGCGCCCAC GTTCGAGGGC
CAGGAGGCCC AGATCGAGCT GATCCTGGAC GACGTGTTCG CGCTGACCCT GTGGCAGTCG
GCCGACACCA AGGAGCACGG CTTCGGCTAC GGCAACGTGG ACCGCTGGAA CGAGTCCATC
AAGGCCCAGG TCGGCTTCAA GCTGATCGAC AAGGAGTTCG ACGCCGACGA GATGGTGAAG
AACGTCCGAT GA
|
|---|
| Protein sequence | MSSSTLSRRR FGALTAVVAT AAALVACSPA DAGSSSSSGE GGTKKVTMQI DGSAVPYYAP
LYAAQKQGFF KNHGLEVEFT YAQGADIVQN VAAGNVDFGF PNGDSVITAY AKGIKTNVVH
TTYQQGIGAL LFRDDSGIKT PADLKGRKVG VTDLGSANYA QLQAMLAKEN VPLSEVQVET
IGTGAIVDAM KNGQVDAIVF SRLRYYALLQ AGVGVGQVLS DEYLPSFGNI VIANPEKVNS
DAETVKSFNA ALNEGIQYVI DNVGEATRMA IKDYAPTFEG QEAQIELILD DVFALTLWQS
ADTKEHGFGY GNVDRWNESI KAQVGFKLID KEFDADEMVK NVR
|
|---|
| |