Gene Amir_4614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4614 
Symbol 
ID8328812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5496964 
End bp5497632 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content76% 
IMG OID644945061 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102293 
Protein GI256378633 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACCG CCCAGGACCG ACCGCTGCGC CGCGACGCGC AGCTCAACCG GGACCGCATC 
GTCAGCGCCG CCGGGGAGGT CTTCGCCCGG CGCGGCCTCG CGGGCACGTT CCACAACGTC 
GCGGACGAGG CGGGCGTCGG CCTCGGCACC GTCTACCGCC GCTTCCCGAC CAAGGAGCAA 
CTGGTGGAAG CCGTCTACCG GCAGCACCTC GCGGGCCTGG TCGCCACGGC CGAGGCCGCC 
CTGCGCGCCC CCACCGGCTG GGACGGCCTG GTCGACGTCC TGACCACCGC CGCCCGCCTG 
CACGCCTCCG ACCAGGGCCT GCGCGACGTC GCACTGGCGC GCGGCCACCG CCCCGAGGCG 
TTCCGCGAGT TCGGCGACCG CATGGAACCC CTGCTGCGCG ACCTGGTCGA GCGGGCCAGG 
ACCGAGGGAA GCCTGCGCCC CGACGTCACC GCCGAGGACC TGCCGGTCGT CATGGCCATG 
ATCAGCGAAC TGGCCCTGCA CGCCGACCCG GTCCGCCCCG GCCTGCACAC CCGCTACCTC 
GCCCTCGTCC TCGACGGCCT CCGCGCCCCG GCCACGACCC CCCTCGGCGA CCCGCTCACC 
AGGACCGAGC TGGACGCCGT CGCCGAGAAC TGGCTGCCCG CGCTGGAACC CCGCGAGGAC 
GCGGGCTGA
 
Protein sequence
MPTAQDRPLR RDAQLNRDRI VSAAGEVFAR RGLAGTFHNV ADEAGVGLGT VYRRFPTKEQ 
LVEAVYRQHL AGLVATAEAA LRAPTGWDGL VDVLTTAARL HASDQGLRDV ALARGHRPEA 
FREFGDRMEP LLRDLVERAR TEGSLRPDVT AEDLPVVMAM ISELALHADP VRPGLHTRYL 
ALVLDGLRAP ATTPLGDPLT RTELDAVAEN WLPALEPRED AG