| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4595 |
|---|
| Symbol | |
|---|
| ID | 8328793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5458029 |
|---|
| End bp | 5459063 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644945042 |
|---|
| Product | Poly(3-hydroxybutyrate) depolymerase-like protein |
|---|
| Protein accession | YP_003102274 |
|---|
| Protein GI | 256378614 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAG TCACGAGGCG GTCCGGGCTC GCGCTGGCCG TCCTGGTCTC GTCCGCCGCC
TGCGCGGGAG CCGAGCCCGT CGCGCCGCCG CCGGCCCCCG CCCCGACCGC CCCGTCCGCC
GTCGCGGTGG AGCGGTTCAC CCCGGTCGAG CGCCGCCCCG TCGCGGACGC CACCACCACC
GCCCGCGAGG TCGTCGTCGC CGGGCGGACC CGCGCCTACC GGCTGCACGC CTCGCCGGGG
GCGCCCGCCC TGCCCGAAGG CCGCCCGCTG GCGCTCGTGC TGCACGGCAA GGGCGGTTCC
GCCGAGGAGA TGGAGCGGCA CAGCGGGTTG AACGCCGCCG CGGACGCCGC GGGCGTGGCG
CTGGCCTACC TGGAGGGCGT GGCCGAGGGC TGGAGCGCCT CGCCGGAACC CACCGATCTG
CGCCCGGACC CGGACGCCGA CGTGGACTTC GCCCGCGCGG TCGTGGACGA GCTGACCGGC
GCCGCGCGCG TGGACCCCGA CCACGTGTAC GCGATCGGGT TCTCCGAGGG CGGGATGATG
GCGCTGCGCC TGGCCGCCGA GCACCCCGAC TGGTTCGCGG GCGTCGCGTC CGTGGCGGGG
CAGCTGCCGG GTCCCCCGGC CGAGGTGCGA CCGACCGGCC CGATCCCGGT GCTGTCGATC
TACGGCGACG CCGATCCGCT GCGCCCGTTC GACGGGCTCT CCACCGCGCC CGCGGACACG
CCCGCGATCG GCAAGGAGCC GCCGAAGCCG ACGATCTCCA CCGCCGAGAC CGTGGAGGCG
TTCTGCCGGG CGGGCGGCGC GGACGAGCGG CGGCGCGAGG AGGCGCGGCC CGCCGCGTCA
CCGGGCGGCA CCTCGACCAG CCGGGAGACC TGCGCCAACC CCGACAGCGG CCTGCGCGTG
GTGTCGATCA CCGTGCACGG GGGCGGGCAC ACCTGGCCGG GCGGCACGTT CCCGTACCGC
CCGGCTGTGG TCGGGGCCAC CGACCGTCAG CTGTCGGCCG CCGACACCGC CGTCGACTTC
CTGCTCGGCG GCTGA
|
|---|
| Protein sequence | MIGVTRRSGL ALAVLVSSAA CAGAEPVAPP PAPAPTAPSA VAVERFTPVE RRPVADATTT
AREVVVAGRT RAYRLHASPG APALPEGRPL ALVLHGKGGS AEEMERHSGL NAAADAAGVA
LAYLEGVAEG WSASPEPTDL RPDPDADVDF ARAVVDELTG AARVDPDHVY AIGFSEGGMM
ALRLAAEHPD WFAGVASVAG QLPGPPAEVR PTGPIPVLSI YGDADPLRPF DGLSTAPADT
PAIGKEPPKP TISTAETVEA FCRAGGADER RREEARPAAS PGGTSTSRET CANPDSGLRV
VSITVHGGGH TWPGGTFPYR PAVVGATDRQ LSAADTAVDF LLGG
|
|---|
| |