| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4360 |
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| Symbol | |
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| ID | 8328557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5152509 |
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| End bp | 5153840 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 644944824 |
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| Product | glycosyl transferase family 28 |
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| Protein accession | YP_003102057 |
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| Protein GI | 256378397 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000448703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTCC TGTTCACGCC GCTCCCGGTG GACCCGAGCC TGCGCGGCCT GGCCCCGCTG
GCCTGGGCGC TGCGCGCCGC CGGTCACGAG GTGCGCGTCG CGGTCCGCCC CTCGGGCGTG
GAGGCGGTCA CCGGTGCGGG CCTCACCGCC GTCCCGGTCG GCGACCGCGG TGACGCGCCC
ACCCCGATCC CCGCGCAGGG CGGCAGGCCC GACGGCGGCG ACCGCCTGCT GCACCTGGAC
GACGCGCTGC TCGACGACCT GCTCGACTTC GCCGAGACCT GGCGACCGGA CCTGCTGGTG
TGGGACCAGG CCGTGCTCGC GGGCCCGGTG GTGGCGAAGC TCCTCGGCGT CCCGCACGTG
CGCGTCCCGC ACGCCGTCGA CGTCGTCGGC CTGCACCGCG CGGGCCTGGC CCCCGACCAC
CCGGACGGCC TGACCGCCAA GCTCGGCGCG GCCCTGGCCC GCAGGGGCGC GGTGTTCACC
GAGGACGTCG CGGTCGGCGA CCTCACCGCC GACCAGCTCC CACCGGGCAC CCGCCCACCC
GTCGACCTGG ACCACCTGCC ACTGCGCCCC ACCCCGCACG ACGGCCCGGC CGAACTCCCG
GACCACCTGC GCGAACAGCC GGCGGGCCCG CGCGCCCACC CCGCCCCGCG CGACGATCCG
GCCGAACCGC CCGCCGCCCC GCGCGCCCAC CCCGCCCCGC GCGCCCACCC CGCCCCGCAC
GACGGCCCAG CCGAACCGCC ACCCCGCCCC CGCCCCCGCG TCTGCCTGGC CCTCGCCCGC
CCCGACCGCG AAGGCGGCCT CACCCCCGCC GAGCGCGCCA CCGCCGAGGT CCTCGTCCGG
GGCGCCACGC GGCTGGACGT CGAGCTGATC GCCCTGCTGC CCACCGGATC GCCCCCGCTC
CCGCCACCCG CCACCACCCA CCCGCACGAC CACGAGCCCC CGCGGGAACT CCTCCGCGCC
TGCGCCGCGA TCGTCCACCG CGGCGACCCC GCCACCACCT CCGCCGCCAC CGCCGCGGGC
CTGCCCCAGC TCGTGGCCCC CGGCGGCGCC TGGGACGAGC CGAACCTCGC CGCCCTGCTC
GCCGACCGGG GCGTCGCCCT CGTCCTGGAC CGCACCCACC TCACCGAGGA CGCCGTGGCC
GAGCACCTCC TGCGCCTGCT CGACGAACCC GCGTTCACCG ACCGCGCCGA GGCCCTGCGC
GCGGACGTCC TCGCCCAGCC GACCCCGCAC GACGCCGTGC ACCGCCTGGA GGACCTGGTC
GCCGAGCGCA CCGGACGGGT GGTCCCGTGG GCGCGCGGCG CGAGGCCCGG TCGAACGGCG
GCCCGGCGCT GA
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| Protein sequence | MRVLFTPLPV DPSLRGLAPL AWALRAAGHE VRVAVRPSGV EAVTGAGLTA VPVGDRGDAP
TPIPAQGGRP DGGDRLLHLD DALLDDLLDF AETWRPDLLV WDQAVLAGPV VAKLLGVPHV
RVPHAVDVVG LHRAGLAPDH PDGLTAKLGA ALARRGAVFT EDVAVGDLTA DQLPPGTRPP
VDLDHLPLRP TPHDGPAELP DHLREQPAGP RAHPAPRDDP AEPPAAPRAH PAPRAHPAPH
DGPAEPPPRP RPRVCLALAR PDREGGLTPA ERATAEVLVR GATRLDVELI ALLPTGSPPL
PPPATTHPHD HEPPRELLRA CAAIVHRGDP ATTSAATAAG LPQLVAPGGA WDEPNLAALL
ADRGVALVLD RTHLTEDAVA EHLLRLLDEP AFTDRAEALR ADVLAQPTPH DAVHRLEDLV
AERTGRVVPW ARGARPGRTA ARR
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