Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3307 |
Symbol | |
ID | 8327497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3881859 |
End bp | 3882383 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644943819 |
Product | isochorismatase hydrolase |
Protein accession | YP_003101059 |
Protein GI | 256377399 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000323098 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTCC AGCCCGCCGT GGTCGCCCGC TACCCCGACC CGGCCTACCT CCCCAGGCTC GCCACCGCGC TCGAGGCGGC CCGCGCCGCG TCCGTGCCGG TGATCCACGT CGGCGTCGGC TTCCGCCCCG ACTACGCGGA GATCCACCCG CGCAACAAGA TGTTCGGCCG CCTGGCCGCG GCCCCCAGGG GCTCCGGCGC CACCGACTTC CACCCCGAGA CCGCGCCGCT CGACGACGAG GTGGTGGTGA CCAAGCGCCG CGTCAGCGCG TTCGCGGGCA GCGACCTGGA CCTCGTCCTG CGCGCCCAGG GCGTCGACCA CCTGGTGCTC ACCGGCATCG CGACCAGCGG CGTGGTCCTG TCCACCCTCC GCCAGGCCGC CGACCTGGAC TTCCAGCTCA CCGTCCTGGC CGACGGCTGC CTGGACGGCG ACCCCGAGGT GCACCGCGTG CTCACCGAGA AGGTCTTCCC GACGCAGGCC GAAGTCCGGA CGATCGCGGA CTGGGCGGGG TCCCTGGACG TGTGA
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Protein sequence | MDVQPAVVAR YPDPAYLPRL ATALEAARAA SVPVIHVGVG FRPDYAEIHP RNKMFGRLAA APRGSGATDF HPETAPLDDE VVVTKRRVSA FAGSDLDLVL RAQGVDHLVL TGIATSGVVL STLRQAADLD FQLTVLADGC LDGDPEVHRV LTEKVFPTQA EVRTIADWAG SLDV
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