| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3244 |
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| Symbol | |
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| ID | 8327434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3779653 |
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| End bp | 3780615 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644943757 |
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| Product | glycoside hydrolase family 25 |
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| Protein accession | YP_003100997 |
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| Protein GI | 256377337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0027526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGACT ACGGCATCGA CATCGCCAGC CACCAGGGCG ACCGGATCGA CTGGCCCGCC
GTCGCGGGCC ACAACATCAC CTACTGCTCG GTGAAGACCA CCGAGGGCAC CACCTACACC
AACCCCCTGG CCGCCGCGCA GGTCGACGGC GCCCGCCGTG TCGGCATCGC GGTCGGCGGC
TACCACTACG CCCACCCCGG CAACGTCGCA GGACAGGTCG GCTACTTCGC CGCAAGCCTG
CACGCCCGCG GGCTGCTCGC CGAGGGCTCG ATGTGGCCCA TGCTCGACAT GGAGGAGGAC
GGCTTCGGCG ACCCCAACGA CTTCATCGCC GAGTTCGTCG AGCGCTTCCG CGCCGCGACC
GGCGCGCCGC TGCTGGTCTA CGCCAACCAG AACTGGTTCA CCCGGCTCCT GCGCCCCCAC
GAGTGGGCCG ACGATCGCGT GCTGCTGTGG GTCGCGCAGT ACAACGGCGA CCCCGGCCGC
CCGGACTACT CCCACCCCCG ACTCGCCCTG CACCAGCACA CCAGCAGCGG CAACGTCCAC
GGCTTCCCCA AGCCTGTCGA CCGCAACGCC ACCCTTCCCG GCTGGTTACG CGACGCGTTC
ATCCTCGGCA CCCCGCCCAC CCCCGCACCC CAGCAGCCCG CCCCGGCCCC CGCTGGCTGG
GTGCCCTACG TCATCGCCCC CGGCGACACC CTCTCCGCCA TCGCCGCCCG CACCGGCACC
ACCGTGGCCG AGCTCGCACA CCGCAACGGC ATCCCCGACC CGGACCTGAT CCACGCGGGC
CGCGTCATCC AGGTCCCCGG CACCGGGGGA GCGGGCGGCG GCGAGCGCTA CCAGATCCGC
CCCGGCGACA CCCTCTCCGC GATCGCCGCC CGCTGGAGCA CCACCGTGGC CGCCATCGCC
GCGCGCAACA ACATCGCCGA CCCGAACCGC ATCTACGCCG GTTCCTGGCT CACCCGCCCG
TGA
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| Protein sequence | MTDYGIDIAS HQGDRIDWPA VAGHNITYCS VKTTEGTTYT NPLAAAQVDG ARRVGIAVGG
YHYAHPGNVA GQVGYFAASL HARGLLAEGS MWPMLDMEED GFGDPNDFIA EFVERFRAAT
GAPLLVYANQ NWFTRLLRPH EWADDRVLLW VAQYNGDPGR PDYSHPRLAL HQHTSSGNVH
GFPKPVDRNA TLPGWLRDAF ILGTPPTPAP QQPAPAPAGW VPYVIAPGDT LSAIAARTGT
TVAELAHRNG IPDPDLIHAG RVIQVPGTGG AGGGERYQIR PGDTLSAIAA RWSTTVAAIA
ARNNIADPNR IYAGSWLTRP
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