| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2198 |
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| Symbol | |
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| ID | 8326387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2432446 |
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| End bp | 2434215 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942747 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_003099988 |
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| Protein GI | 256376328 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.552552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC TCAAGCCGGA ACCCGTGGTC GTCCGCCCCG GCGCGGGCGC GCGAGGGTCC
AAGGGGTCGG TGCTGCTGGG GTTGCTGCGC ACCACCGATC CCAAGCGGAT CGGGCTGATG
TACCTGGTGA CGTCGTTCTT CTTCTTCCTC GTCGGCGGCC TGATGGCCCT GCTCATGCGG
GGCGAGTTGG CCCGTCCGGG GATGCAGTTC CTCTCCAACG AGCAGTACAA CCAGCTGTTC
ACCATGCACG GGACGGTGAT GCTGCTGCTC TACGCCACCC CGATCGTGTT CGGCTTCGCC
AACTACGTGC TGCCGCTGCA GATCGGCTCG CCGGACGTCG CGTTCCCCCG GCTCAACGCG
CTCTCGTACT GGCTCTACCT GTTCGGCGCG ACGGTGACGG TCAGCTCGAT GCTCACCCCG
GCCGGGGCTC CCGACTTCGG GTGGACCGCC TACACCCCGC TGTCGACGGC CGCGCACTCC
CCCGGCGTCG GCGCGGATCT GTGGATCCTC GGGCTGGCGC TCGGCGGGGT CGGCACGATC
CTGGGCGCGG TCAACATGAT CACCACCGTG GTGTGCCTGC GCGCGCCAGG CATGACCATG
TGGCGGTTGC CGATCTTCAC CTGGAACATC CTGGTCACCA GCGTGCTGAT CCTGCTGGCG
TTCCCGATCC TGACCGCGGC GCTGCTCGCG CTCGCCGCCG ACCGGCACCT CGGCGCGCAC
GTGTTCGACC CGGCCAACGG CGGCGTGATC CTGTGGCAGC ACCTGTTCTG GTTCTTCGGC
CACCCCGAGG TGTACATCAT CGCGCTGCCG TTCTTCGGCA TCGTCACCGA GGTGTTCCCG
GTGTTCAGCC GCAAGCCCCT GTTCGGGTAC AAGGGCCTGG TGTTCGCCAC GCTCGCGATC
GCCGCCCTGT CGGTGGCGGT GTGGGCGCAC CACATGTTCG CGACCGGCGC GGTGCTGCTG
CCGTTCTTCT CGCTGATGAC GTTCCTGATC GCGGTGCCGA CCGGCATCAA GTTCTTCAAC
TGGATCGGCA CGATGTGGAA GGGGCAGCTC ACGTTCGAGT CGCCCATGCT GTTCTCGATC
GGGTTCCTGG TGACGTTCCT GTTCGGCGGC CTGTCCGGCA TCCTGCTCGC GTCGCCGCCG
ATCGACTTCC ACGTGCACGA CACGTACTTC GTCGTCGCCC ACTTCCACTA CGTCCTGTTC
GGCACGATCG TGTTCGCCAC CTTCGCCGGG ATCTACTTCT GGTTCCCCAA GATGACCGGC
CGGATGCTGG ACGAGGGCCT GGGCAAGCTG CACTTCTGGA CCACGTTCCT GGGCTTCCAC
GCCACGTTCC TGGTGCACCA CTGGCTGGGC AACGAGGGGA TGCCGCGCCG GTACGCCGAC
TACCTGCCGT CGGACGGGTT CACCTTCCTG AACACGCTGT CCACGATCGG GTCGTTCGTG
CTGGGCGCGT CGGTGCTGCC GTTCGTGTGG AACGTGGTGC GCAGCCACCG CTACGGCGAG
CTCGCGGGCG TGGACGACCC GTGGGGGTTC GGCAACTCGC TGGAGTGGGC CACCTCGTCG
CCGCCGCCCA GGCACAACTT CACCGAGCTG CCGCGCATCC GCAGCGAGCG GCCCGCGTTC
GAGCTGCACC ACCCGCACAT GGTCGACCGG ATGCGGGCGG AGGCGCACTT CTCGCTGCGC
AGGGGCGGGG AGTCGACCCC GCCGGACCCG ACGACCGAGC AGGCGCTCGC GCCGACCGAC
CGCAACCGGA AGAGCCCCTC GGACGAGTGA
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| Protein sequence | MTALKPEPVV VRPGAGARGS KGSVLLGLLR TTDPKRIGLM YLVTSFFFFL VGGLMALLMR
GELARPGMQF LSNEQYNQLF TMHGTVMLLL YATPIVFGFA NYVLPLQIGS PDVAFPRLNA
LSYWLYLFGA TVTVSSMLTP AGAPDFGWTA YTPLSTAAHS PGVGADLWIL GLALGGVGTI
LGAVNMITTV VCLRAPGMTM WRLPIFTWNI LVTSVLILLA FPILTAALLA LAADRHLGAH
VFDPANGGVI LWQHLFWFFG HPEVYIIALP FFGIVTEVFP VFSRKPLFGY KGLVFATLAI
AALSVAVWAH HMFATGAVLL PFFSLMTFLI AVPTGIKFFN WIGTMWKGQL TFESPMLFSI
GFLVTFLFGG LSGILLASPP IDFHVHDTYF VVAHFHYVLF GTIVFATFAG IYFWFPKMTG
RMLDEGLGKL HFWTTFLGFH ATFLVHHWLG NEGMPRRYAD YLPSDGFTFL NTLSTIGSFV
LGASVLPFVW NVVRSHRYGE LAGVDDPWGF GNSLEWATSS PPPRHNFTEL PRIRSERPAF
ELHHPHMVDR MRAEAHFSLR RGGESTPPDP TTEQALAPTD RNRKSPSDE
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