Gene Amir_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1602 
Symbol 
ID8325786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1766670 
End bp1767212 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID644942151 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003099397 
Protein GI256375737 
COG category[R] General function prediction only 
COG ID[COG5018] Inhibitor of the KinA pathway to sporulation, predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.038144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCGC TGCTGGACCG CGTGCTCGTG GTCGACGTCG AGGCGACCTG CTGGGAGGGC 
GCGCCGCCCG GTGGGCAGGT CAGCGACATC ATCGAGATCG GGGTGTGCGA GTACGACGTC
GCGCTCGGCG AGCGGGTCGA GCGGCACTCG CTGCTGGTGC GCCCGACGCG GTCCGAGGTG
AGCCCGTTCT GCACGTCGTT GACGACGTTG ACGCAGGAGC AGGTCGGGCG CGGGGTGGAC
TTCGGGGTGG CGTGCGCGCG GTTGCGGGAG CTGGGGTCGC GCGAGCGGGT GTGGGCGAGC
TACGGGGACT ACGACCGCAA CCAGTTCCAG CGGCAGTGCG CCGACCTGGG CGTGGCCTAC
CCGTTCGGGC CCAGGCACCT GAACGTGAAG ACGTTGTTCG CGCTGTCGCG GGGGCTGCAC
CGGGAGGTCG GCATGGCCCA GGCGCTGGCG CTGGCCGGGT TGCCGCTGGA CGGCACGCAC
CACCGGGGCG ACGACGACGC GTGGAACATC GCGGCGCTGC TCGGGACGCT GCTGGTCAGG
TGA
 
Protein sequence
MKALLDRVLV VDVEATCWEG APPGGQVSDI IEIGVCEYDV ALGERVERHS LLVRPTRSEV 
SPFCTSLTTL TQEQVGRGVD FGVACARLRE LGSRERVWAS YGDYDRNQFQ RQCADLGVAY
PFGPRHLNVK TLFALSRGLH REVGMAQALA LAGLPLDGTH HRGDDDAWNI AALLGTLLVR