Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1602 |
Symbol | |
ID | 8325786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1766670 |
End bp | 1767212 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942151 |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_003099397 |
Protein GI | 256375737 |
COG category | [R] General function prediction only |
COG ID | [COG5018] Inhibitor of the KinA pathway to sporulation, predicted exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.038144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCGC TGCTGGACCG CGTGCTCGTG GTCGACGTCG AGGCGACCTG CTGGGAGGGC GCGCCGCCCG GTGGGCAGGT CAGCGACATC ATCGAGATCG GGGTGTGCGA GTACGACGTC GCGCTCGGCG AGCGGGTCGA GCGGCACTCG CTGCTGGTGC GCCCGACGCG GTCCGAGGTG AGCCCGTTCT GCACGTCGTT GACGACGTTG ACGCAGGAGC AGGTCGGGCG CGGGGTGGAC TTCGGGGTGG CGTGCGCGCG GTTGCGGGAG CTGGGGTCGC GCGAGCGGGT GTGGGCGAGC TACGGGGACT ACGACCGCAA CCAGTTCCAG CGGCAGTGCG CCGACCTGGG CGTGGCCTAC CCGTTCGGGC CCAGGCACCT GAACGTGAAG ACGTTGTTCG CGCTGTCGCG GGGGCTGCAC CGGGAGGTCG GCATGGCCCA GGCGCTGGCG CTGGCCGGGT TGCCGCTGGA CGGCACGCAC CACCGGGGCG ACGACGACGC GTGGAACATC GCGGCGCTGC TCGGGACGCT GCTGGTCAGG TGA
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Protein sequence | MKALLDRVLV VDVEATCWEG APPGGQVSDI IEIGVCEYDV ALGERVERHS LLVRPTRSEV SPFCTSLTTL TQEQVGRGVD FGVACARLRE LGSRERVWAS YGDYDRNQFQ RQCADLGVAY PFGPRHLNVK TLFALSRGLH REVGMAQALA LAGLPLDGTH HRGDDDAWNI AALLGTLLVR
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