Gene Amir_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1520 
Symbol 
ID8325700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1676742 
End bp1677398 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID644942067 
ProductTrkA-N domain protein 
Protein accessionYP_003099317 
Protein GI256375657 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.498959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCG CCATCGCAGG CGCGGGCGCG GTGGGGCGCT CCATCGCGCA GGAGCTGGTC 
GCGGACGGGC ACCAGGTGAT GCTGATCGAG CGGGACCGGG CGCACTTCGA GCCGCACACC 
GTCGAGCAGG CCGAGTGGGT GCAGGCCGAC GCGTGCGAGC TGTCCTCGCT GGAGGACGCC 
GGGCTCCAGC TGTGCGACGT GGTCATCGCG GCCACCGGGG ACGACAAGGT CAACCTGGTG 
GTGTCGCTGC TGGCGAAGAC CGAGTTCGCG GTGCGGCGGG TCGTGGCGCG GATCAACGTG 
CCCAGCAACG AGTGGCTGTT CACCAAGGCG TGGGGGGTGG ACGTGGCGGT GTCGACGCCG 
CGCATCCTGT CCGCGCTGGT GGAGGAGGCG GTCACGGTCG GGGACGTGGT GCGGCTGGTG 
ACGCTCCAGC AGGGGCAGGC GAACCTGGTG GAGATCACGC TCACCGAGGA CACGCCGCTG 
GCCGGGACGC CGGTGCGGGA CCTGGCGCTG CCCAGGGACG CGGCGCTGGT GACGATCCTG 
CGCGGCGGGC GGGTGATCGT GCCGACCCCG GACGACGCGC TGGAGGGCGG GGACGAGCTG 
CTGTTCGTGG CGGCGCAGGA CGTGGAGCGG GAGATCAGGA CGGCGCTCGG GTACTGA
 
Protein sequence
MRIAIAGAGA VGRSIAQELV ADGHQVMLIE RDRAHFEPHT VEQAEWVQAD ACELSSLEDA 
GLQLCDVVIA ATGDDKVNLV VSLLAKTEFA VRRVVARINV PSNEWLFTKA WGVDVAVSTP 
RILSALVEEA VTVGDVVRLV TLQQGQANLV EITLTEDTPL AGTPVRDLAL PRDAALVTIL 
RGGRVIVPTP DDALEGGDEL LFVAAQDVER EIRTALGY