Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1487 |
Symbol | |
ID | 8325667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1642464 |
End bp | 1643456 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644942034 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_003099284 |
Protein GI | 256375624 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTCG ACGGGGTGCT GTTCTTCCCG GTGACACCGT TCGACGCGGG CGGCGGGCTC GACGAGGCGG TGCTGGCCGA GCACGTCAGG CGCGGTGTCG CCGCCGGGGC GGGCGGCGTC TTCGTCGCGT GCGGCACCGG GGAGTTCCAC GCGCTGGCGC CGGACGAGTT CGAGCGCGCG GTCGCGGTCG CGGCGCGGGT CACCGAGGGC AGGGTGCCGG TGTTCGCGGG AACCGGCGGA CCGCTGCCCA CGGCGCGCCG CTGCGCCGAG GCCGCCCACC GCGCGGGCGC GGACGGCCTG CTCCTGCTCC CGCCCTACCT GGTGTCCGGA CCGCCCGCCG GGCTGGTGCG CTACGTCGCC GGGGTGGCCG ACGCCACCGA CCTGCCGGTG ATCGCCTACC AGCGCAACAA CGCCGTGTTC ACCCCGGCCA CCGCGGTCGA GATCGCCGCG CTGCCGACCG TGGTGGGCCT CAAGGACGGT CTCGGAGACA TCGACCTGCT GCACCGGATC GTGCTCGCCG TGCGCGAGCG GGTCGAGAAG CCGTTCCAGT TCTTCAACGG GCTGCCCACC GCCGAGCTGA CCGTCCCGGC CTACCGGGGC ATCGGCGTGG ACCTGTACTC GTCCGCCGTG TTCTGCTTCG CCCCCGAGGT CTCGCTCGGC TTCTACCGGG CCGTGCACGC CGACGACACC GCCCTGGTGC GCCGCTACCT CACCGAGTTC TACCGGCCGC TGGTCGAGCT GCGCGACCGC GTCCCCGGCT ACGCCGTCTC GCTGGTCAAG GCCGCCGTCC GGGCCACCGG CCTCGACGTC GGCGGCGTCC GCGCGCCCCT GGTCGACCCC TCGCCCGAGC ACCTCGCGGA GCTGGAGCTG GTCGTGGCGG CGGGCCGGGC GCTCGCGCTG GAGACGGCGG GGAGCGCGCA GGAGACCGGG GTGAACGGCT CCTCGGCGGG CGGTGCGAAC GGGGCGGTCG GGCAACCGGA GCTCGCCGGA TGA
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Protein sequence | MQLDGVLFFP VTPFDAGGGL DEAVLAEHVR RGVAAGAGGV FVACGTGEFH ALAPDEFERA VAVAARVTEG RVPVFAGTGG PLPTARRCAE AAHRAGADGL LLLPPYLVSG PPAGLVRYVA GVADATDLPV IAYQRNNAVF TPATAVEIAA LPTVVGLKDG LGDIDLLHRI VLAVRERVEK PFQFFNGLPT AELTVPAYRG IGVDLYSSAV FCFAPEVSLG FYRAVHADDT ALVRRYLTEF YRPLVELRDR VPGYAVSLVK AAVRATGLDV GGVRAPLVDP SPEHLAELEL VVAAGRALAL ETAGSAQETG VNGSSAGGAN GAVGQPELAG
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