| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0538 |
|---|
| Symbol | |
|---|
| ID | 8324697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 580973 |
|---|
| End bp | 582172 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644941082 |
|---|
| Product | N-isopropylammelide isopropylaminohydrolase |
|---|
| Protein accession | YP_003098351 |
|---|
| Protein GI | 256374691 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000264228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGAG ACCTGCTGAT CCGCTCAGTC CGCCCGTGGC CCGCCGACCC CGGTGCGCCG
ACCGTCGACG TCCTCTGCTC GAACGGCACC CTCACCGCCT TCGGCCCGCA CCTCCCCGCC
CCACCCGGCG CCACCGTCGT CGACGGGCGG AACGGCGTGC TCCTCCCCGC CTTCACCGAC
GCCCACGCGC ACCTCGACTC CACCCGCCTC GGCCTCCCCT TCCGCCCGCA CTCCGCAGGT
CCCGGCCTCA CCGCCCTGGT CGACAACGAC CGCCGCCACT GGCGCGCCGA CGAGCCCGTC
GCCGACCGCG CCACCCGCAC CCTCGGCCGC ACCATCGCCT CCGGCGCCAC CCACGTGCGC
AGCCACGCCC AGGTCGACGT CGACTCCGGC CTCGAACGCC TCGAAGGCGT CCTCGCCGCC
CGCGAGGCCC ACCGCGACCG GGCGCTCGTG CAGGTCGTCG CGTTCCCCCA GTGCGGCATC
CTGCGGGAGA AGGGCACCGC CGACCTGCTC GACGCCGCGC TGCGGGCGGG CGCCGACCTG
ATCGGCGGGC TCGACCCCGC CTCCGTCGAC CGCGACCCCG TCAAGCACCT CGACACCGTC
TTCAGCCTCG CCGAGAAGCA CCAGTGCGGC GTCGACCTGC ACCTGCACGA CGACGGCACC
CTCGGCGCGT TCCAGATCGA GCTGGTCTGC GAGCGCGTCG CCGCCCTCGG GATGCGCGGC
GAGGTCACCA TCAGCCACGC GTTCGCCCTG TCCACCGTCG ACGACCACCG CCAAGGCCTG
CTCGTCGACC TCCTCGCCGA GCACGACGTC GCCGTCACCA CCGTCGCCCC CGGCGCCCGC
GACCCCCTGC CGCTGCACCG CCTGCGCCGC GCGGGCGTGC GCCTGGGCCT GGGCCAGGAC
GGCATCCGCG ACCACTGGTC CCCCTACGGC GACGGCGACA TGCTCGGCCG CGCCTGGCAG
CTCGCCTACC GGGGCGGGTT CCGCCGGGAC GACCAGGTCG AGATGTGCGT CGACATCGCC
ACCAGGGGCG GCGCGGCCGT GCTCGGGGCC CGCCTCGGCC TCACCGAGGG CTCGCCCGCG
TCCGTCGTGG TCGTGCCCGG CGACACGGTC ACCGCCGCCG TCATGGACCG CGCCCCGCGC
GCGCTCGTCG TGCACGCGGG GCGCGTCGTC GCCAGGGACG GCGAGCTGGT CAGAACCTGA
|
|---|
| Protein sequence | MPGDLLIRSV RPWPADPGAP TVDVLCSNGT LTAFGPHLPA PPGATVVDGR NGVLLPAFTD
AHAHLDSTRL GLPFRPHSAG PGLTALVDND RRHWRADEPV ADRATRTLGR TIASGATHVR
SHAQVDVDSG LERLEGVLAA REAHRDRALV QVVAFPQCGI LREKGTADLL DAALRAGADL
IGGLDPASVD RDPVKHLDTV FSLAEKHQCG VDLHLHDDGT LGAFQIELVC ERVAALGMRG
EVTISHAFAL STVDDHRQGL LVDLLAEHDV AVTTVAPGAR DPLPLHRLRR AGVRLGLGQD
GIRDHWSPYG DGDMLGRAWQ LAYRGGFRRD DQVEMCVDIA TRGGAAVLGA RLGLTEGSPA
SVVVVPGDTV TAAVMDRAPR ALVVHAGRVV ARDGELVRT
|
|---|
| |