| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0449 |
|---|
| Symbol | |
|---|
| ID | 8324608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 485657 |
|---|
| End bp | 487000 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644940993 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_003098262 |
|---|
| Protein GI | 256374602 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTGC TGCCCGAGCC GGTGTCGGTG GTCTGGGGCG GGGGGACCGT GCCGTGGTCG
ACGCCGGTCG TGCGGCGCGC GCCAGGACCG GCCGAGGGCT ACCGGATCTC CATCTCCGCG
GGCGGCGTCC ACGTCGACGC GTCCGACGAC GCGGGCGAGT TCTACGCCCA CCAGACCCTG
CGCCAGCTGC GCGGACCCGA CGCGTTCCGG GCCGCGCCGA TCCGGCCGGA CGGGCCCGTG
CCGGTGTGCG AGATCGTCGA CCACCCGGAG CACCGGTGGC GCGGCTGCAT GATCGACGTG
GCGCGGCACT TCCTGCCCAA GCACGACCTG CTGCGGTACG TGGACCTGCT GGCCGCGCAC
AAGCTCAACG TGCTGCACCT GCACCTGACC GACGACCAGG GCTGGCGGGT CGAGTCCGAG
CGCTTCCCGA GGCTGCACGA GGTCGGCGGC TGGCGGCCGG ACTCGCGGTG GGGCGACCGG
CGCGGCGGGC TGAGCACCGG GAGGCCGCAC GGCGGGTGCT ACACGCGGGA CGACCTGCGC
GAGGTCGTGG CGTACGCGGC GGCGCGGCAC GTGACCGTGG TGCCGGAGAT CGACGTGCCG
GGGCACTCGC AGGCGGCCAT CGCGGCGTAC CCGGAGCTGG GCGTCGACGG CGGCGGGGTG
TGGACCGACT GGGGGGTGAA CCCGCGCGTC CTCAACGGGT CGCAGTCCAC AGTGGACTTC
TACCGCGCGG TGTTCGACGA GCTGCTGGAG GTGTTCCCCG GCGAGGTGGT CGGCTTCGGC
GGCGACGAGG CGCCGGGTGG CGACGGGCGG TTCGTGCGCC TGATCGCGGA GCACCTCGTG
GCGCGCGGGC GCAGGCCCTA CGGCTGGGAC GAGGTGCTGG ACGTCGAGGG GCTGCCGGAG
GAGACGGTCA TCGCGGCGTG GCGCTCGGAG GAGGCCGTGG AGCGGGCGCT GGAGCGCGGG
CTGGACGTGG TCGCCTGCCC GGAGCGGCAC GCGTACCTGG ACTACCGGCA GTCCGAGGAC
GCGGACGAGC CGATCCCGGT GGGCACGGTC CTCACCACCG AGGACGTGCG CGCGTACCGG
CCGGTGGCCG GGGTGCTCGG CGCGCAGGCG AACATCTGGA CCGAGCACCT GGACAGCCCG
AGGCGCCTGG ACTACGCCGC GTTCCCGAGG CTCTCGGCGT TCGCGGAGGT GGTGTGGAAC
CCGGCCCCGG TGGACGGGGC CGGGTTCGCG GCGAGGCTGG GCGCGCACCT GCCCAGGCTC
GCCGCGCTCG GCGTCGAGTA CCGGCCGCCG GGCGGACCGC TGCCGTGGCA GCGCCTGCCA
GGGGTGCCCG GTCACCCGCG CTGA
|
|---|
| Protein sequence | MTLLPEPVSV VWGGGTVPWS TPVVRRAPGP AEGYRISISA GGVHVDASDD AGEFYAHQTL
RQLRGPDAFR AAPIRPDGPV PVCEIVDHPE HRWRGCMIDV ARHFLPKHDL LRYVDLLAAH
KLNVLHLHLT DDQGWRVESE RFPRLHEVGG WRPDSRWGDR RGGLSTGRPH GGCYTRDDLR
EVVAYAAARH VTVVPEIDVP GHSQAAIAAY PELGVDGGGV WTDWGVNPRV LNGSQSTVDF
YRAVFDELLE VFPGEVVGFG GDEAPGGDGR FVRLIAEHLV ARGRRPYGWD EVLDVEGLPE
ETVIAAWRSE EAVERALERG LDVVACPERH AYLDYRQSED ADEPIPVGTV LTTEDVRAYR
PVAGVLGAQA NIWTEHLDSP RRLDYAAFPR LSAFAEVVWN PAPVDGAGFA ARLGAHLPRL
AALGVEYRPP GGPLPWQRLP GVPGHPR
|
|---|
| |