Gene Amir_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0439 
Symbol 
ID8324598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp475190 
End bp475798 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content77% 
IMG OID644940983 
Productprotein of unknown function DUF124 
Protein accessionYP_003098252 
Protein GI256374592 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.615646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGTGC GGACCAGGCA CACGCCCGGC TACGGCGTCG CGAGGCTGCT GCTGGCCCCG 
GCCGAACCGG TGCTCGTGGA GCGCGGCTCC GTGCTCGGCA CCAGCTACGG CGTCGGCTTC 
GACACCCGCG CCAAGGGCAA GGGCGTGCGC GCCGCGCTGT GCACGGCGGG CCCCGAGGGC 
GGCTGGGTGG ACGTGGCCCC CGGCGTGCCC GGCGACCTGC ACGTGGTCGA CCTGGACGGC 
AAGTCCGGCT GGTGCTTCGC GGGCGACGCC TGGCTCGCCT GCGCGGGCAC CGTCGGCCTC 
GACCCGGCCG CGCCGCCCCT GCGCGCCCTG CACGGCGGCG ACGCGGGCTT CCTCAACTAC 
GCCTTCGGCA CCGGCCCGCT CGTGCTGGCC TGCGCGGGCG CCGTCGACGT CGTCACCCTC 
GAACCCGGCG AGCTGGTCAC CCTGCACAGC GGACACGTGC TCGCCTTCGC CGACACCGTC 
CAGTGCAGGC TCCGCGCCGT CTCCCCGGAC CTGCCGCAGT CGGTCCGCGA CGGCGAGGGC 
CTCGCGCTCG ACTTCGCCGG GCCCGGACTC GTGCTCACCC GCACCCGCAA ACCGCGCCGC 
AGGTCGTGA
 
Protein sequence
MQVRTRHTPG YGVARLLLAP AEPVLVERGS VLGTSYGVGF DTRAKGKGVR AALCTAGPEG 
GWVDVAPGVP GDLHVVDLDG KSGWCFAGDA WLACAGTVGL DPAAPPLRAL HGGDAGFLNY 
AFGTGPLVLA CAGAVDVVTL EPGELVTLHS GHVLAFADTV QCRLRAVSPD LPQSVRDGEG 
LALDFAGPGL VLTRTRKPRR RS