Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0313 |
Symbol | |
ID | 8324471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 342757 |
End bp | 344988 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644940858 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003098128 |
Protein GI | 256374468 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGCA AGCGCCTGCT TCGCAACCCG CTGCTGTGGA TCGTGGCGGT GGTGCTCCTC TTCTACGTCT TCAGCGTGCT CTTCGACGAG GACCGGAACT ACCACCAGGT CACGACCTCC CAAGCCCTCC AACAGGTGCG GGACGGGAAG GTCAAGGAAG CCACGATCGA GGACAAGGAG CAGAAGCTCA AACTCGTCCT CAACGACGGT TCCACCTTCG AGAACCACGG CCTCCTGATG GCCTCGTACC CGGCCAGTGC CACGGACGAG GTGTTCACCC TGGTCGACCA GGCGGGCAAC AAGCCGCAGG TCGAGACCAA GGTGACCCAG GACTCCCTGC TCACGCAGAT GCTCCTGTAC CTGGTGCCGC TGGGGCTGCT GCTCCTGCTG CTGATGTGGA TGATGAACAA CGCCCAGGGT GGCGGGAACC GCGTCCTCAA CTTCGGCAAG TCCAAGGCAA AGCAGCTCTC CAAGGACATG CCCAAGACGA CGTTCGCCGA CGTCGCGGGA GCCGAGGAGG CGGTGGAGGA GCTCTACGAG ATCAAGGACT TCCTCCAGAA CCCCGGCCGC TACCAGGCGC TCGGGGCGAA GATCCCGAAG GGCGTCCTGC TCTACGGGCC CCCCGGCACC GGCAAGACCC TGCTGGCCAG GGCCGTCGCC GGTGAGGCGG GCGTGCCGTT CTACTCGATC TCCGGCTCGG ACTTCGTCGA GATGTTCGTC GGCGTCGGCG CCTCGCGCGT GCGCGACCTG TTCGAGCAGG CCAAGCAGAA CGCGCCCTGC ATCATCTTCG TCGACGAGAT CGACGCGGTG GGCCGCCACC GCGGCGCGGG CATGGGCGGC GGGCACGACG AGCGCGAGCA GACGCTCAAC CAGCTGCTCG TGGAGATGGA CGGCTTCGAC TCGCGCGGCG GGATCATCCT GATCGCGGCG ACCAACCGGC CCGACATCCT CGACCCCGCC CTGCTGCGCC CCGGCCGCTT CGACCGGCAG ATCCCGGTGT CCGCGCCGGA CCTGAAGGGC CGCAAGCAGA TCCTCCGGGT GCACGCCAAG GGCAAGCCGT TGGCCCCTGA CACCGACCTC GACGGCCTGG CCAAGCGCAC CGTCGGGTTC TCCGGAGCCG ACCTGGCCAA CGTCATCAAC GAGGCCGCGC TGCTCACCGC CCGCCAGAAC GGCACCGTCA TCGACGGCTC CGCGCTGGAG GAGTCGGTCG ACCGCGTCAT CGGCGGTCCC GCCCGCAAGA GCCGGATCAT CTCCGAGAAG GAGAAGAAGA TCACGGCCTA CCACGAGGCG GGCCACGCGC TGGCCGCGTG GGCGATGCCG GACATCGACC CGGTCTACAA GGTCACCATC CTCGCCAGGG GGCGCACCGG CGGTCACACG CTGTCCGTCC CCGAGGAGGA CAAGGACCTG ATGACCAGGT CCGAGATGAT CGCCCGGCTG GTGTTCGCGC TCGGTGGCCG CTCGGCGGAG GAGCTCGTCT TCCACGAGCC CACCACCGGC GCGTCCAACG ACATCGAGCA GGCGACCAAG ATCGCCCGCG CGATGGTCAC CGAGTACGGC ATGAGCTCCC GCCTCGGCGC CGTCAAGTAC GGCCAGGAGC AGGGCGAGCC GTTCCTCGGC CGCAACGCCG GTCGCCAGGC CGACTACTCG CTGGAGGTCG CGCACGAGAT CGACGAGGAG GTGCGCAAGC TCATCGAGGC CGCCCACACG GAGGCCTACG AGGTGCTGAA CACCTACCGC GACGTCCTCG ACGACCTGAC GCTGGAGCTG ATCGACAAGG AGACGCTCCA CCAGAAGGAC CTGGAGCGGA TCTTCGCGGG CGTCGAGAAG CGCCCCCGGA TCACCCAGTT CAACGACTTC GGCAACCGCA TCCCGTCGAC CAAGCCGCCG GTCAAGACCC CCGGCGAGCT GGCCAGGGAG CGCGGCGAGC CGTGGCCGCC GGTGGTCGAG GACCAGGTCG AGGCCGAGCC CGCGGCACTG CCCGCGCCCG CACCCGAGAC CCCGCAGGGA CCGGCCCAGC CGCAGCAGGT CCCCGCTGGC GCCAACGGCG TCCAGCACCC GCCGCAGCAG GTCACCCCCG GCTCGGGGCC GCCCAACTAC GGGGCGCCCC CCGGCTGGAC CCCGGCCACC GTGCCGGGCA GCGGGGGCCA GCCGACCACA CCCGCGTGGC GGCCGGACCC GGCGGACGCG GACAAGCGGA ACTTCGACTC GGACCCGGAC AACCGCAAGT GA
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Protein sequence | MDRKRLLRNP LLWIVAVVLL FYVFSVLFDE DRNYHQVTTS QALQQVRDGK VKEATIEDKE QKLKLVLNDG STFENHGLLM ASYPASATDE VFTLVDQAGN KPQVETKVTQ DSLLTQMLLY LVPLGLLLLL LMWMMNNAQG GGNRVLNFGK SKAKQLSKDM PKTTFADVAG AEEAVEELYE IKDFLQNPGR YQALGAKIPK GVLLYGPPGT GKTLLARAVA GEAGVPFYSI SGSDFVEMFV GVGASRVRDL FEQAKQNAPC IIFVDEIDAV GRHRGAGMGG GHDEREQTLN QLLVEMDGFD SRGGIILIAA TNRPDILDPA LLRPGRFDRQ IPVSAPDLKG RKQILRVHAK GKPLAPDTDL DGLAKRTVGF SGADLANVIN EAALLTARQN GTVIDGSALE ESVDRVIGGP ARKSRIISEK EKKITAYHEA GHALAAWAMP DIDPVYKVTI LARGRTGGHT LSVPEEDKDL MTRSEMIARL VFALGGRSAE ELVFHEPTTG ASNDIEQATK IARAMVTEYG MSSRLGAVKY GQEQGEPFLG RNAGRQADYS LEVAHEIDEE VRKLIEAAHT EAYEVLNTYR DVLDDLTLEL IDKETLHQKD LERIFAGVEK RPRITQFNDF GNRIPSTKPP VKTPGELARE RGEPWPPVVE DQVEAEPAAL PAPAPETPQG PAQPQQVPAG ANGVQHPPQQ VTPGSGPPNY GAPPGWTPAT VPGSGGQPTT PAWRPDPADA DKRNFDSDPD NRK
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