Gene Phep_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4168 
Symbol 
ID8255303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5041177 
End bp5041968 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content44% 
IMG OID644937833 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_003094421 
Protein GI255534049 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000324578 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000679641 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTATTT TAGATAAAAT TGTAATTCGT AAAAAGGAAG AGGTAGCACA GGCAAAGCAG 
GTCGTTTCTG TTAAACAGCT TGAATCCGGC CTGCACTTCA ACCGTGATCC TTATGTGTTT
AAAGATTTTT TACTGGCCCC GGACAGGACC GGGATTGTTG CGGAGTTTAA AAGGAGATCG
CCATCTAAGG GCATCATTAA TGATCGGGTA ACTGTTGAAG AGGTTACGCA GGCTTACGCT
GCGGCAGGGG CCTCGGCCCT ATCGGTTTTA ACAGATGTTG ATTTCTTTGG CGGCCATGCC
GACGACTTGC TGGCAGCAAG GGCGGCAAAC AGAATTCCTG TATTGAGAAA GGATTTTATG
ATAGATGAAT ACCAGGTACT GGAAGCAAAG GCACTTGGGG CTGATATTAT TTTGCTGATT
GCTGCTATTT TGACACCTGC AGAGATCAGA AACCTGTCGG CCCTGGCCAA AAATCTGGGA
TTAAATGTAT TGCTGGAGGT ACACGACCAG GAAGAGCTGC AGCGCAGTAT TTGTAAAGAT
TTAGATGCGA TTGGTGTAAA TAACCGTAAC CTGGCCGATT TTACAGTGAA TATTCAAACT
TCTTTTGAAC TGGTGGAGCA GATACCGGAT GAATTCATGA AGATATCGGA GAGTGCCATA
AGTGCAGTTG AAACCATAAA AGACCTGAAA AACGCAGGTT TTAATGGTTT TCTGATAGGG
GAGAACTTTA TGAAAACCAC CAATCCGGGA CAGGCAATGC GCGACTTTGC CACACAATTG
ATCTCGGTAT AA
 
Protein sequence
MTILDKIVIR KKEEVAQAKQ VVSVKQLESG LHFNRDPYVF KDFLLAPDRT GIVAEFKRRS 
PSKGIINDRV TVEEVTQAYA AAGASALSVL TDVDFFGGHA DDLLAARAAN RIPVLRKDFM
IDEYQVLEAK ALGADIILLI AAILTPAEIR NLSALAKNLG LNVLLEVHDQ EELQRSICKD
LDAIGVNNRN LADFTVNIQT SFELVEQIPD EFMKISESAI SAVETIKDLK NAGFNGFLIG
ENFMKTTNPG QAMRDFATQL ISV