Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4168 |
Symbol | |
ID | 8255303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5041177 |
End bp | 5041968 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937833 |
Product | Indole-3-glycerol-phosphate synthase |
Protein accession | YP_003094421 |
Protein GI | 255534049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000324578 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000679641 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTATTT TAGATAAAAT TGTAATTCGT AAAAAGGAAG AGGTAGCACA GGCAAAGCAG GTCGTTTCTG TTAAACAGCT TGAATCCGGC CTGCACTTCA ACCGTGATCC TTATGTGTTT AAAGATTTTT TACTGGCCCC GGACAGGACC GGGATTGTTG CGGAGTTTAA AAGGAGATCG CCATCTAAGG GCATCATTAA TGATCGGGTA ACTGTTGAAG AGGTTACGCA GGCTTACGCT GCGGCAGGGG CCTCGGCCCT ATCGGTTTTA ACAGATGTTG ATTTCTTTGG CGGCCATGCC GACGACTTGC TGGCAGCAAG GGCGGCAAAC AGAATTCCTG TATTGAGAAA GGATTTTATG ATAGATGAAT ACCAGGTACT GGAAGCAAAG GCACTTGGGG CTGATATTAT TTTGCTGATT GCTGCTATTT TGACACCTGC AGAGATCAGA AACCTGTCGG CCCTGGCCAA AAATCTGGGA TTAAATGTAT TGCTGGAGGT ACACGACCAG GAAGAGCTGC AGCGCAGTAT TTGTAAAGAT TTAGATGCGA TTGGTGTAAA TAACCGTAAC CTGGCCGATT TTACAGTGAA TATTCAAACT TCTTTTGAAC TGGTGGAGCA GATACCGGAT GAATTCATGA AGATATCGGA GAGTGCCATA AGTGCAGTTG AAACCATAAA AGACCTGAAA AACGCAGGTT TTAATGGTTT TCTGATAGGG GAGAACTTTA TGAAAACCAC CAATCCGGGA CAGGCAATGC GCGACTTTGC CACACAATTG ATCTCGGTAT AA
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Protein sequence | MTILDKIVIR KKEEVAQAKQ VVSVKQLESG LHFNRDPYVF KDFLLAPDRT GIVAEFKRRS PSKGIINDRV TVEEVTQAYA AAGASALSVL TDVDFFGGHA DDLLAARAAN RIPVLRKDFM IDEYQVLEAK ALGADIILLI AAILTPAEIR NLSALAKNLG LNVLLEVHDQ EELQRSICKD LDAIGVNNRN LADFTVNIQT SFELVEQIPD EFMKISESAI SAVETIKDLK NAGFNGFLIG ENFMKTTNPG QAMRDFATQL ISV
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