Gene Phep_4061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4061 
Symbol 
ID8255195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4903620 
End bp4904798 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content45% 
IMG OID644937725 
Producthypothetical protein 
Protein accessionYP_003094314 
Protein GI255533942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGA AATGCCTTGT TAAAACTGCT TTAATCTCCT TCTTATTTGC AGTTTGCAAT 
GAGGGATTTG CGCAGGTTGT GGAGCCTGGT ACGCAGCCCA ATGGCAGCGA AATCAATAAC
ATCATCACTG CTGTTCCTTT TTTGCTCATC ACACCAGATG CCCGTGCCGG AAGCATGGGC
GATGCAGGCG TAGCGGTACA GCCTGATGCA AATGCCAGTG GCATCAACCC TTCCAAACTT
GCTTTTTTAG ATAAAAAATA CGGCTTCTCT GTTTCGTACA GTCCCTGGTT AAAAAGCCTG
GTCCCAGACA TCAGTCTGAC TTACCTGGCT GGTTTCTATA AGCCAGATGA ACGGACCACT
ATTGGCAGCT CCCTGCGCTA TTTTAATCTC GGCGAGATCC AGCTGACGGA TATCAACCAG
AACAATCTGG GTGTATATAC ACCTAATGAA CTGGCTTTTG ATGTGACTTA TGCCAGGCGC
ATGGGCGAAT CTTTTTCATT GGGTACTTCC TTAAGGTATA TTTATTCGAA CCTTAGTTCG
GGGCAGTTTT CGGCCGGTCA GCAAACGCAT GCTGCCTCTG GTATAGCAGT CGATGTATCC
GCTTACTTTA AAAAACCTAC TGTATTTTTA GGAACAGATG CCATCCTTTC GGCCGGTCTT
AACCTTTCAA ATATTGGCAC CAAGGTCAGT TATTCCGATA GCGGCCCCAA GTCTTTTTTG
CCTGCAAACA TGAAAATAGG CGGGGCCTCC ACTTTTCTGA TCGATGATTA TAACCAGTTT
ACTTTTGCCC TGGATTTTAA CAAGCTGATG GTACCTACAC AGCCGGTTTA TGATGCCAAC
GGGAAGATCA TTTCGGGTAA AGACCCCGAC CGCTCCGTCC CTGCCGGTAT CTTTGGTTCA
TTTGCTGATG CGCCGGGCGG TTTTAGTGAA GAGCTGAAAG AAATAAACAT TGCTGCCGGA
ATGGAATACT GGTATAACCA GCAGTTTGCT TTAAGGGCCG GATATTTTTA TGAAAACCCG
AAAAAAGGCA ACAGACGTTA CGCAACTCTT GGCGCTGGGT TAAAATATAA TGTGTTTAAT
ATGGATATTG CCTATCTGCT TGCCAATGCA GATAAGAACC CATTGGCCAA TACCCTAAGG
TTTACCTTAC TGTTTAACTT TGGCAGCACT CAAAATTAA
 
Protein sequence
MNLKCLVKTA LISFLFAVCN EGFAQVVEPG TQPNGSEINN IITAVPFLLI TPDARAGSMG 
DAGVAVQPDA NASGINPSKL AFLDKKYGFS VSYSPWLKSL VPDISLTYLA GFYKPDERTT
IGSSLRYFNL GEIQLTDINQ NNLGVYTPNE LAFDVTYARR MGESFSLGTS LRYIYSNLSS
GQFSAGQQTH AASGIAVDVS AYFKKPTVFL GTDAILSAGL NLSNIGTKVS YSDSGPKSFL
PANMKIGGAS TFLIDDYNQF TFALDFNKLM VPTQPVYDAN GKIISGKDPD RSVPAGIFGS
FADAPGGFSE ELKEINIAAG MEYWYNQQFA LRAGYFYENP KKGNRRYATL GAGLKYNVFN
MDIAYLLANA DKNPLANTLR FTLLFNFGST QN