Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3684 |
Symbol | |
ID | 8254815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4397551 |
End bp | 4398285 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937345 |
Product | ABC transporter related |
Protein accession | YP_003093937 |
Protein GI | 255533565 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTAA GAGCTGAACA TCTCATCAAA AAATATAAGC AGCGAACAGT TGTTAACGAT GTGTCATTTA GTGTAAGTCA GGGTGAAATT GTGGGTTTGC TGGGACCTAA TGGTGCAGGT AAGACAACAT CTTTTTATAT GATTGTCGGC CTGATCAAAC CCAATGAGGG TACCATTTTT TTGGATGAAC AGGATATCAC CAAAGACCCT ATGTACCGCA GGGCCCAGAA AGGCATAGGA TACCTTGCTC AGGAAGCATC GGTATTCAGA AAGCTTTCGG TTGAGGACAA CATCATGGCC ATTTTAGAAA TGACAAAAAT GAACAGGGAG GAGCGCCATG AAAAACTGGA AGAACTGATT ACAGAATTTA GCTTGCATAA AGTACGTAAA AACAGGGGTG ATCTGCTGTC TGGTGGAGAA CGGCGAAGGA CGGAAATTGC GAGGGCCCTG GCTGCAAGCC CGAATTTCAT TTTATTGGAT GAACCTTTTG CAGGAGTAGA CCCCATTGCT GTTGAAGAAA TCCAGACCAT TGTAGCTAAG CTTAAACAAA AAAATATTGG AATATTGATT ACAGACCATA ATGTTCAGGA GACCTTGTCT ATTACCGACA GGGCATACCT GCTTTTTGAA GGTAAAATAC TGGAATCGGG CACACCAGAA GTACTTGCGG CCAATGAGAT GGTGAGAAGA GTTTATCTTG GTTCGAATTT CGTACTGCGC AAAAAACAAT TATAG
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Protein sequence | MILRAEHLIK KYKQRTVVND VSFSVSQGEI VGLLGPNGAG KTTSFYMIVG LIKPNEGTIF LDEQDITKDP MYRRAQKGIG YLAQEASVFR KLSVEDNIMA ILEMTKMNRE ERHEKLEELI TEFSLHKVRK NRGDLLSGGE RRRTEIARAL AASPNFILLD EPFAGVDPIA VEEIQTIVAK LKQKNIGILI TDHNVQETLS ITDRAYLLFE GKILESGTPE VLAANEMVRR VYLGSNFVLR KKQL
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