Gene Phep_3684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3684 
Symbol 
ID8254815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4397551 
End bp4398285 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID644937345 
ProductABC transporter related 
Protein accessionYP_003093937 
Protein GI255533565 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA GAGCTGAACA TCTCATCAAA AAATATAAGC AGCGAACAGT TGTTAACGAT 
GTGTCATTTA GTGTAAGTCA GGGTGAAATT GTGGGTTTGC TGGGACCTAA TGGTGCAGGT
AAGACAACAT CTTTTTATAT GATTGTCGGC CTGATCAAAC CCAATGAGGG TACCATTTTT
TTGGATGAAC AGGATATCAC CAAAGACCCT ATGTACCGCA GGGCCCAGAA AGGCATAGGA
TACCTTGCTC AGGAAGCATC GGTATTCAGA AAGCTTTCGG TTGAGGACAA CATCATGGCC
ATTTTAGAAA TGACAAAAAT GAACAGGGAG GAGCGCCATG AAAAACTGGA AGAACTGATT
ACAGAATTTA GCTTGCATAA AGTACGTAAA AACAGGGGTG ATCTGCTGTC TGGTGGAGAA
CGGCGAAGGA CGGAAATTGC GAGGGCCCTG GCTGCAAGCC CGAATTTCAT TTTATTGGAT
GAACCTTTTG CAGGAGTAGA CCCCATTGCT GTTGAAGAAA TCCAGACCAT TGTAGCTAAG
CTTAAACAAA AAAATATTGG AATATTGATT ACAGACCATA ATGTTCAGGA GACCTTGTCT
ATTACCGACA GGGCATACCT GCTTTTTGAA GGTAAAATAC TGGAATCGGG CACACCAGAA
GTACTTGCGG CCAATGAGAT GGTGAGAAGA GTTTATCTTG GTTCGAATTT CGTACTGCGC
AAAAAACAAT TATAG
 
Protein sequence
MILRAEHLIK KYKQRTVVND VSFSVSQGEI VGLLGPNGAG KTTSFYMIVG LIKPNEGTIF 
LDEQDITKDP MYRRAQKGIG YLAQEASVFR KLSVEDNIMA ILEMTKMNRE ERHEKLEELI
TEFSLHKVRK NRGDLLSGGE RRRTEIARAL AASPNFILLD EPFAGVDPIA VEEIQTIVAK
LKQKNIGILI TDHNVQETLS ITDRAYLLFE GKILESGTPE VLAANEMVRR VYLGSNFVLR
KKQL