Gene Phep_3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3636 
Symbol 
ID8254767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4348596 
End bp4350263 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content46% 
IMG OID644937297 
Producthypothetical protein 
Protein accessionYP_003093889 
Protein GI255533517 
COG category[S] Function unknown 
COG ID[COG5368] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.289719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAT TTAAAAAGCT ATTGTTTTAC ACCGGATGTT CCTGTCTTTT GCTACTGCTT 
GCCAGTTGCA GTAAAAGCAA AGAATCGGGC GTGTCAGCTA CCGATACCTC CTTATCCTTT
ACCGTAAACG GAGCTTACAA TGGCACTTTA AATTATGAGG TAAATGGAAA ACCGGTTATC
AAATTCAGCT TTACAGAAGC GATAGATCCG GCAACAATAG CTGCAGGTGT TAAACTTACC
GATGCAGCCG GCGCAAATGT GGCCTTTAGC CAGGCTTTAC AGGATGCAGA TAAAACCCTC
AGCATTACCC CACAAAACAA CTTTTTGTCC TTTGCCGGTT ATCACCTCGA AATAACCAAT
GCCATAAAAC CGGCAAAGGG TGGACGACTG CTCAATCCGG TAAGGATCAG CCTCAGTACC
GGTTTTGACG ATACTGATAA ATGTCCTCGG ATTTCTGATG ATGAACTGCT TACACTGATC
CAGCAACAGA CTTTTAAATA CTTTTACGAT TTCGGACATC CCGTAAGTGG CCTGGCCCGT
GAAAGGAGCA CTTCCGGCAA TACAGTAACT TCCGGTGGTT CCGGATTTGG TGTTATGGCG
CTGGTTACCG GTGTACACCG CAGTTTTATT ACCCGTGCCG CGGGCCTGGC AAGAATGCAG
AAAATCGTAG ATTTTTTAAA AAACAAAGCC AGCCGTTTTC ATGGGGCTTA CCCCCACTGG
CTGGATGGCA ATACCGGGGC CGCATTGCCC TTTAGTACAA AAGACAATGG CGGCGACCTG
GTAGAAACTT CCCTGCTGAT GCAGGGTTTG CTTACCGCAC GCCAGTATTT TACTGGCAGT
GATGCTGCCG AAACCGCTTT AAGGAATGAC ATTACCTCCA TTTATAACGG AGTGGAATGG
GACTGGTACC GTAAAAACAA CAGTGATGTA TTGTACTGGC ACTGGAGCCC GGATTACAAC
TGGGAAATGA ACCTGCCCAT TAGCGGATAT AACGAATGTC TGATCACTTA TGTGCTGGCC
GCATCTTCCC CTACCCATAG CATCCCCAAA TCGGTGTACG ATATAGGCTG GGCAAAAAAC
GGTGCCATAA AAAATGGCAA CAGCTATTAT GGCATACCAT TGCCATTGGG CACTGCCAAT
GGTGGTCCGC TGTTTTTCGC CCATTATTCC TTTCTCGGCC TGAATCCTAT GGGCTTAACA
GATACTTATG CCAATTACGA AACACAGAAC AGGGCGCATA CCCTCATCAA TTATAAATAC
TGTGCAGACA ATCCTAAAAA ATATGCCGGT TATAGCGAGA ACTGCTGGGG ACTTACCGCC
AGCGATATTC CTAATGGTTA TGCAGCAAGC TCTCCAGCTA ACGACCGTGG TGTAATTGCA
CCAACAGCAG CCCTTTCTTC TTTCCCTTAT ACACCTGTAG AATCTATGCA GGCCTTAAAA
TTCTTTTATT ACAAATTGGG CGACAAACTC TTTAAGGACT ATGGCTTTGT AGATGCCTTC
TCGCTACAGG AAAAATGGTT TGACACCCAA ACTCTTGCCA TAGACCAGGG GCCAATTGTC
ATTATGATCG AAAACTACCG CAGCAAATTG CTATGGAATT TGTTTATGAC TGCGCCGGAA
GTTAAATCGG GCTTGCTTAA ACTGGGTTTT AACAGCCCTA ATTTATAA
 
Protein sequence
MTQFKKLLFY TGCSCLLLLL ASCSKSKESG VSATDTSLSF TVNGAYNGTL NYEVNGKPVI 
KFSFTEAIDP ATIAAGVKLT DAAGANVAFS QALQDADKTL SITPQNNFLS FAGYHLEITN
AIKPAKGGRL LNPVRISLST GFDDTDKCPR ISDDELLTLI QQQTFKYFYD FGHPVSGLAR
ERSTSGNTVT SGGSGFGVMA LVTGVHRSFI TRAAGLARMQ KIVDFLKNKA SRFHGAYPHW
LDGNTGAALP FSTKDNGGDL VETSLLMQGL LTARQYFTGS DAAETALRND ITSIYNGVEW
DWYRKNNSDV LYWHWSPDYN WEMNLPISGY NECLITYVLA ASSPTHSIPK SVYDIGWAKN
GAIKNGNSYY GIPLPLGTAN GGPLFFAHYS FLGLNPMGLT DTYANYETQN RAHTLINYKY
CADNPKKYAG YSENCWGLTA SDIPNGYAAS SPANDRGVIA PTAALSSFPY TPVESMQALK
FFYYKLGDKL FKDYGFVDAF SLQEKWFDTQ TLAIDQGPIV IMIENYRSKL LWNLFMTAPE
VKSGLLKLGF NSPNL