Gene Phep_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3503 
Symbol 
ID8254623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4169950 
End bp4171404 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content49% 
IMG OID644937153 
Productcarbohydrate kinase FGGY 
Protein accessionYP_003093756 
Protein GI255533384 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTT ATTTTATAGG AATAGATATA GGCACACAAG GGGCAAGGGT AGTATTACTG 
GACGCCGCTG GAACAGTGCT GGCCAGTGCA GCTGAGGTAT TTCCCCTGAA TGAAGAGTCG
AGGGAGGAGC AGTCGCCCGA AGTATGGTGG GCAGCCTGTG TAACCTCCTT AAAAGCGCTG
AAAACCAGTG TTCCTGATGT CGATTTTACG GAGGTACTGG CTATGGCTGT AACTTCTACT
TCGGGTACAG TGATCCCTTT GGATGCGCAG CACCAGCCCT TGCACAATGC GATCATGTAT
AGCGACAAGC GTTCGGGTAA GCAGGCCAAA ATATGTACTG CGGCAGCTGT TAAATACCAC
AATAAGGGTT TTACGGCATT TAACAGTTCA AGTGCACTGG CCAAGATCGT TTGGTTTGGT
GATACTTATC CGGAAAAGGC AGCGCAAATA GCTAAATGGA TCCATGCGGC GGATTACATT
ACCGGGAAAT TAAGCGGGCG TTGGGGCCTG ACCGACTATA CCAATGCTTT TAAAACGGGC
TATGATGTAA GCGATTACGA ATGGCCTGAA TATTTATATA CCCATCTGCC TTTGAAAAAA
TCCTGGCTGC CGGAAGTGTT CCCTTCGGGA ACGGTGATCG GTACTTTGGA TCCGGCTGTT
GCCGCTTCAC TGGGTCTGCC TGCGAGCATA CAGGTAACGG TAGGTATTAC CGATGGCTGT
GCCTCACAGA TTGCATCCGG TGCAGTGAAA CCAGGTGAAT GGAACACGAC GATTGGTACC
ACCATGGTTA TTAAAGGGGT AACGAAAAAG CAGATCGTGG ATGAAGAGGG CCGTATTTAT
AGTCACAGGC ATCCTGCTGG TTACTGGATG CCAGGAGGTG CAAGCAATAC GGGGGCCGAC
TGGGTAACGA ATGAGTTTGG GGATAACCTG GAAGCATTGG GCAAGGCTGC AGAAAAGCTG
ATCCCTACAG ACCTGATTGC TTATCCTTTG CGCCAGCATG GCGAGCGTTT TCCTATGGTG
GCTCCGGATG CGGTGGGCTT TGAACCGGAA GGTTTATCGA TGGCAGAGCG TTTTACCGCC
AATATGGAAG GTGTAGCTTA TCTGGAGCGC TTTTCTTTTG AGCTGATACA GGGCTTTACC
AATGAAAAGA TCAGCGCTGT TTTTACTGCA GGTGGTGGGA GCAACAGCGA GGTATGGTTG
AAAATACGCA GTAATGTGCT GAACCTGCCC ATTTATAAGA TGAAGGAAGT GTCGGGCGCT
GTTGGTGCGG CAATTCTGGC CGCATCGAAC ACCCATTTCA GTTCACTTGC TGATGCCGTG
GCTGCTTTAA CAACCATTGA TAAGGAAGTG CATCCGGAAC CAGAACTGGC TGCCGTGTAT
AATAAAAATT ACCACAGGTT TTTAGACCTG TTACTGGAAA AAGGTTACAT TAAAAAGGGA
GAACTGCATG CTTAA
 
Protein sequence
MAPYFIGIDI GTQGARVVLL DAAGTVLASA AEVFPLNEES REEQSPEVWW AACVTSLKAL 
KTSVPDVDFT EVLAMAVTST SGTVIPLDAQ HQPLHNAIMY SDKRSGKQAK ICTAAAVKYH
NKGFTAFNSS SALAKIVWFG DTYPEKAAQI AKWIHAADYI TGKLSGRWGL TDYTNAFKTG
YDVSDYEWPE YLYTHLPLKK SWLPEVFPSG TVIGTLDPAV AASLGLPASI QVTVGITDGC
ASQIASGAVK PGEWNTTIGT TMVIKGVTKK QIVDEEGRIY SHRHPAGYWM PGGASNTGAD
WVTNEFGDNL EALGKAAEKL IPTDLIAYPL RQHGERFPMV APDAVGFEPE GLSMAERFTA
NMEGVAYLER FSFELIQGFT NEKISAVFTA GGGSNSEVWL KIRSNVLNLP IYKMKEVSGA
VGAAILAASN THFSSLADAV AALTTIDKEV HPEPELAAVY NKNYHRFLDL LLEKGYIKKG
ELHA