| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3347 |
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| Symbol | |
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| ID | 8254466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3969884 |
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| End bp | 3972049 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936999 |
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| Product | ABC-type bacteriocin transporter |
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| Protein accession | YP_003093603 |
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| Protein GI | 255533231 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0880292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AAGTAAAACA ACGCGACATC ACAGATTGCG GCGCAGCCTG CCTGGCCTCT
GTTGCGGCAC ATTACAAATT AGACCTGCCC GTTGCACGCA TCCGGCAGCT GGCCGGAACT
GATAAAAAAG GCACTACCGT TTTGGGCATA GTAGAAGCAG CCCAAAAGCT GGGATTTGAA
GCCAAGGGTG TTAAAGGACC TTTCGAAAGC CTCTTCAAAA TACCCACACC CGCTATTGCC
CATATCCTTG TAGGTACCAT ACTGCAGCAC TATGTAGTCA TTTATAAGGT AAACAAAAAA
TTTATTGAGG TGATGGACCC AATAGACGGG CAGCTGCAGC GCAAAAGCCA TGAAGAATTT
AAAGGCGAAT GGACAGGTGC GCTTGTACTG CTGCTACCTG CAGAAGAATT CCAGGCAGGA
AATGAAAAAA TATCCATACA GGGTCGCTTC TGGAACCTCA TCAAGCCACA TAAGAACATT
TTGATACAAG CCCTGTTTGG CGCTATTGTA TATACCATAC TGGGGCTTTC TACCTCGGTC
TTTGTACAAA AACTTGTCGA TTTTGTCCTG GTAGACAGCA ACCGGAACCT ACTGAACATG
ATGGGTATAG CCATGCTCCT CATCCTGCTG GTACAACTCT TTATCGGCAC TGCAAAAACC
ATTTTTACGT TAAAAACCGG ACAAATGATT GATGCCCAGC TCATCCTTAG CTATTATAAA
CACCTGCTTA AACTTCCCCA GCAGTTTTTT GATACCATGC GTGTAGGCGA GATCATTTCG
CGCATCAATG ATGCGGTAAA GATCAGGACC TTTTTAAATG ATGTCAGCAT CAATTTCCTG
GTCAACCTGT TCATCGTTTT TTTCTCTTTT GTGATGATGT TCACGTATTA TTGGAAACTG
GCTCTTATCA TGCTTTCCGT AATCCCGGTA TACCTGGTGG TCTATGTACT AACCAATAAG
CTTAATAAAA AAGCACAAAG GAAACTGATG GAAGACTCCG CCGAGCTGGA ATCACAATTG
GTAGAAAGTT TAAATGCCAT AGGCACCATC AAACGCTTCG GACTGGAGAA CCACGCCAAT
GAAAAAACAG AGAGCCGGTT TGTAAAACTG TTGCATACAG GTTACAGTTC CAACCTCAAC
TCCGTATTTT CAGGCACCTC TGCTGAACTC ATCTCCCGCC TGCTTACCAT TGTGCTACTC
TGGATAGGTG CCGGTTTTGT ACTCGACAAC ATGCTTACTC CTGGCGAACT GCTCTCCTTT
TACACACTGA TCGGTTATTT TACAGGCCCT ATATCTGCGC TCATAGGCAT GAACAAAACC
TTACAGGATG CCATTATTGC ATCAGACAGG TTATTCGAGA TCATGGATCT GGAACGCGAA
AACGATGAAA ACCAGATTGA ACTGAGCCCG GAACAAATAG GTGACATCCG CTTTGAGCAG
GTATCTTTCC GTTATGGAAC CAGGATAAAT GTATTTGAAG ATCTCAATTT AAGCATCCCA
AAAGGTAAGT TTACAGCCAT TGTTGGCGAA AGTGGTTCGG GCAAATCCAC GCTAATGGCC
ATCCTTCAAA ATATTTACCC CATACAAAAA GGTAACATCA GCATCGGGAA ATATGATTTG
AAGTATATCC GCACAGCATC ATTACGACAA ATCATAGCTG TAGTACCGCA AAAAATAGAT
CTTTTTGCAG GTAATGTGGT CGATAATATT GCCATAGGTG ATCATGAACC CGATATGCAG
CGTATCCTTG ATATTGCAGA GCAATTGGGT ATCCTCGATT TTATAGAAAC CCTGCCCAGG
GGATTTCAAA CCTATCTGGG CGAGAACGGC ACCACTCTTT CAGGCGGACA AAGGCAACGC
ATTGCCATTG CCAGGGCCTT ATACCGGCAA CCTGAAATCC TGATCCTCGA CGAGGCCACC
TCATCCCTCG ATTCTGCTTC CGAACAATAT GTTCAGAAGG CAATCAACCT GTTAAAGACC
TGTAATAAAA CTGTAATTGT AATTGCCCAC CGTTTGAGTA CCTTAAACCA CGCCGATAAG
ATTATAGTGC TCGACAAAGG TAAAGTACTC GAGGAAGGTA CACATAAGGA ATTGTTGTAC
AAAGCAGATT CTGCATATGC TAATCTCTGG AAACTACAAA TGCCACAATT GCTGGTTAAA
AACTGA
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| Protein sequence | MSIKVKQRDI TDCGAACLAS VAAHYKLDLP VARIRQLAGT DKKGTTVLGI VEAAQKLGFE
AKGVKGPFES LFKIPTPAIA HILVGTILQH YVVIYKVNKK FIEVMDPIDG QLQRKSHEEF
KGEWTGALVL LLPAEEFQAG NEKISIQGRF WNLIKPHKNI LIQALFGAIV YTILGLSTSV
FVQKLVDFVL VDSNRNLLNM MGIAMLLILL VQLFIGTAKT IFTLKTGQMI DAQLILSYYK
HLLKLPQQFF DTMRVGEIIS RINDAVKIRT FLNDVSINFL VNLFIVFFSF VMMFTYYWKL
ALIMLSVIPV YLVVYVLTNK LNKKAQRKLM EDSAELESQL VESLNAIGTI KRFGLENHAN
EKTESRFVKL LHTGYSSNLN SVFSGTSAEL ISRLLTIVLL WIGAGFVLDN MLTPGELLSF
YTLIGYFTGP ISALIGMNKT LQDAIIASDR LFEIMDLERE NDENQIELSP EQIGDIRFEQ
VSFRYGTRIN VFEDLNLSIP KGKFTAIVGE SGSGKSTLMA ILQNIYPIQK GNISIGKYDL
KYIRTASLRQ IIAVVPQKID LFAGNVVDNI AIGDHEPDMQ RILDIAEQLG ILDFIETLPR
GFQTYLGENG TTLSGGQRQR IAIARALYRQ PEILILDEAT SSLDSASEQY VQKAINLLKT
CNKTVIVIAH RLSTLNHADK IIVLDKGKVL EEGTHKELLY KADSAYANLW KLQMPQLLVK
N
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