Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3235 |
Symbol | |
ID | 8254354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3841018 |
End bp | 3842142 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936888 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_003093492 |
Protein GI | 255533120 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0867918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTTA TTGTATCCAC ATCAACGCTT TTAAAACATT TGCAAACAGT TAATGGTGCA TCAAGCAGCA GTACTGTTTT GCCTATACTG GAAAATTTCC TGTTTGAGAT TAAAGATGGA AATTTAACGA TATCTGCTAC CGATCTGCAA ACCAGCATGA CCACTTCTTT GCCTGTAGAA TCCAAAGAAG GAGGTAAAGT TGCGGTTCCT GCAAGAATAT TACTTGACAC CTTAAAAACA CTGCCCGATC AGCCAATTTC TTTCAATATT GACGATAGTA CTTTCTCTAT CGAGATCAGC GCGGGCGACG GTAAATACAA ATTGAGCGGA GAGAACGGGG ATGATTTTCC TAAAATCCCG GTTGTTGAAA ATGCTTCATC TGTAAACCTG CCAGCTTCTG TTTTAACTGA GGCCATTACC AAAACAATTT TTGCTGTCAG CAGCGATGAA CTTCGGCCGG CTATGACGGG TGTTTTTTGT CAGCTTTCTG ATCAGCACAT CACTTTTGTA GCTACAGACG CACACAAGTT GGTAAGATAC AGGCGTATGG ACAGTAAAGC AGATAAAAGT TCTTCTTTTA TTTTGCCTAA AAAAGCCCTA ACCCTGCTAA AGGCGGCTTT GCCTTCTACT GACATCAACG TATCTGTAGA TTACAATGCA ACCAGCGCTT TCTTTAAATT TGAGAACATT AATCTGGTTT GCCGTTTGAT TGACGAGCGC TATCCTGATT ATGAGGCGGT TATTCCTGCC AACAATCCAA ATAAACTGGT TATAGACAGG GCTTTGTTCC TGAATACCCT ACGCAGGGTG GTTATTTTTG CAAACAAAAC CACGCATCAG GTGAGGTTAA AGATCAATGG CAGCGAATTA AATATCTCTT CTGAAGACCT TGATTTTGCC AATGAAGCAC ATGAGCGTTT GAGTTGCCAG TATGAGGGTG AAGATCTGGA AATTGGCTTT AATGCTAAGT TTTTAATAGA GATGCTGAGC AATTTAAGCG GCGAAGAGGT GACATTAGAG CTATCTACAC CAAACCGGGC CGGCTTGCTG ATCCCTCAGA CCAATGATGA GAACGAGGAC GTCCTGATGC TGGTGATGCC GGTTATGTTA AACAATTACA ATTAA
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Protein sequence | MRFIVSTSTL LKHLQTVNGA SSSSTVLPIL ENFLFEIKDG NLTISATDLQ TSMTTSLPVE SKEGGKVAVP ARILLDTLKT LPDQPISFNI DDSTFSIEIS AGDGKYKLSG ENGDDFPKIP VVENASSVNL PASVLTEAIT KTIFAVSSDE LRPAMTGVFC QLSDQHITFV ATDAHKLVRY RRMDSKADKS SSFILPKKAL TLLKAALPST DINVSVDYNA TSAFFKFENI NLVCRLIDER YPDYEAVIPA NNPNKLVIDR ALFLNTLRRV VIFANKTTHQ VRLKINGSEL NISSEDLDFA NEAHERLSCQ YEGEDLEIGF NAKFLIEMLS NLSGEEVTLE LSTPNRAGLL IPQTNDENED VLMLVMPVML NNYN
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