| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3119 |
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| Symbol | |
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| ID | 8254237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3728142 |
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| End bp | 3729023 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936772 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093377 |
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| Protein GI | 255533005 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00676861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACT TTGATACCCG CTCCACCACA GAAAGGAGCA TCATAACTTT CAATAAGTTT
AACCTTGACG GAAAAGTCAG ACTGGGCCGG TATTCCTATA AACATGTACA TGGCGAGCTG
GAAACCCATT CACATGATGG CATGATGGAA ATCTGCTACT GCGATAAAGG CATGCAGGTA
TATGAGGTAA ACGGGAAAGA ATACCAGATC AGGGGGGGCG ATGTTTTCAT TACCTTCCCC
AACGAACCGC ATGGAACCGC CAAACACCCG GAAGAAAAAG GCACTTTATA CTGGCTTATT
GTCCAGATCC CGGAAAAAGA AAAATTTCTC CACTATGATA ATGAAGAATC GGCTGTTTTT
ATAAAAGAGC TGCTGGGCAT AAAAGAACGC CATTTTAAAG GAAGCGATGC TATGAAAAAA
ATGCTGGACC AGCTGTTTGC CCTGCATGAA GAGCCTGTAC AGCAACCTTT ATATAAACTT
CATACCTTAA ACCTGATCAG CAACTTTCTT TTAACAGTAA TTGAATATTC ACAAAAAAAT
CCAGTAAGGG CACAATCAGA CCGGATCTCG GAAATTAAAA ACTATATCCA CAACAACATT
TATGAAAGCC TGCCCATAGA ACTGCTGGCG AAAGCGCTGT TTATGTCTGA TTCCCATTTT
AAAAGCTGGT TTAAAAAAGA ATTTGGCATG CCGCCTGTAG ATTATATTTT ACGGACGAAG
ATTGAAGAAG CAAAAAAGCT GCTTTTATTA AAAGACAGCG AATCGGTGAC AGCAATTGCC
TTTAAACTCA ACTTTTCTTC TTCCCAGTAT TTTGCTACAG TCTTTAAAAA ATATACAGGT
GTAAGTCCGG CCGAATTTAA ACAGCGCAAC CTAAAAACTT AA
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| Protein sequence | MSDFDTRSTT ERSIITFNKF NLDGKVRLGR YSYKHVHGEL ETHSHDGMME ICYCDKGMQV
YEVNGKEYQI RGGDVFITFP NEPHGTAKHP EEKGTLYWLI VQIPEKEKFL HYDNEESAVF
IKELLGIKER HFKGSDAMKK MLDQLFALHE EPVQQPLYKL HTLNLISNFL LTVIEYSQKN
PVRAQSDRIS EIKNYIHNNI YESLPIELLA KALFMSDSHF KSWFKKEFGM PPVDYILRTK
IEEAKKLLLL KDSESVTAIA FKLNFSSSQY FATVFKKYTG VSPAEFKQRN LKT
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