| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2773 |
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| Symbol | |
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| ID | 8253881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3272064 |
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| End bp | 3274268 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936419 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003093034 |
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| Protein GI | 255532662 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00141117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA TCCCCAATTT TTTAAAAACC AGTATGCAGC AAACAGTGCT GTTGTTATTG
TTGGCCCTTG TTTGCTGTGC TGATACTGTT CTGGCGCAGC AATCTGGTAA AGCATCCTGG
ATCTGGTATC CTGGCGATCT GGACATCTGG GTATCCAATA AAATGCAAAA CCGCAGAACA
GAAAGGGGAG CTTTTTTGCC ACCATTCTGG AAAATGGATA GCCATTATGT ACTGGTTGAA
TTCCATAAAG AGTTTAACCT GGCCAATGCC GAAGAGGTCA ATCTATATGT AGAGGGACAG
TACAATGTGA AAATTGACGG GCAGGCTTTT TCGGGTTATC CTAAAAAGAT CACCGTACCG
GCAGGTAAAC ACAAACTTAG TTTAAAAGTA TACGGACAGG ATAAAGTACC AGCCATATTG
GTACAGGGAA AAACAGTTGT ATCGGATGAG AGCTGGCTGG CTACTTTTGA AGATAAGGAA
TGGATTGATG CGAGTGGAAA GGCATCCGAT AAATCGGGTA CTACCTTTGT ATCTGCCGCT
TCCTGGAACC TGACCGATCC TTTATCGCCA CCATCCCGGT TTAAGCTGGC CACTACGCCT
ATGGCTGCGG TAAAAACAGA CAAAGTAAAC AATGGTTTTG TGGCCGATTT CGGTAAGGAA
ACCTTTGGCT TTATTAAGCT GCATGGCTTA AAAGGTAAAG GTAAACTGCA CATTTATTAT
GGAGAATCTA AAGAAGAGGC CTTATCTGCC GACCATTGCG AAACCCTGGA CCTGCTGGAA
ATTGACCTGA AGGGAAAACA GGATTCAGTA ATTGAACTTT CCAAAGCTTT CAGGTATGTC
AACTGTCAGC CTGAAGGTAA TGTAACCCTG GATAAAGTGA GCATGTTGTA TGAGTATGCG
CCGGTCACAG AAAAAGGGAA TTTCCGTTGC TCAGATGAGC AGATCAATAA GATCTACGAC
ATTTCTAAGT ATACCTTCCA TCTCAATACC CGCGAATTTT TTATCGATGG GATCAAGCGC
GACCGCTGGG TATGGTCGGG CGATGCTTAC CAAAGCTATC TTATGAACTA TTATTCGTTC
AACGAATCGC CAATTGTGAA ACGGACTTTA CTGGCCCAAA GGGGTAAAGA TCCGGTAACG
GCACATATCA ATACCATTAT GGATTACTCT TTCTATTGGT TTTTAGGAAT TTATGACTAT
TACCAGTATT CGGGTGATCA GAAATTTGTA CAGGATATTT ATCCAAGAAT GAAAAGCCTG
ATGGATTATG TTTTAGGGCG CCGGAATAAG GACGGTTTGC TGGAATGGAT GCCTGGCGAC
TGGATTTTTA TAGATTGGGC CGATAAATTG AGCAAAGACG GGGAAGTGAG TTTTGAGCAA
TTGCTGTTTT GCCGGAGTCT GGAAACTATG GCACTCTGTG CCGATATGGC AAAAGATACT
GAGGCCGCTG CCAATTATAA AAAGCTTGCT GCCGATTTGA AAGCCAGGAT ATTTAAGCTG
TACTGGGACG AGAATAAACA TGCCCTGGTA CATAGCAGGA TTAACGGGAA GCCTACAGAC
AACGTAACAC GTTATGCCAA TATGTTCGGC ATTTTCTTCG ATTACTTTAG TCCTTCACAA
AAACAGGAGG TAAAACAACA TGTATTGATG AACAATAAAA TCAATAAGAT TACTACACCA
TACATGCGTT TTTATGAGCT GGAAGCACTT TGTGCCATGG GCGAGCAATC TTACGTATTG
AAACAAATGA AAGATTACTG GGGCGGTATG CTGGAATTGG GTGCTACCTC TTTCTGGGAA
GAATATAACC GTGATAAAAA AGGGGTAGAG CATCTGGCTA TGTACGGCAG GCCTTTTGGT
AAAAGCCTTT GTCATGCCTG GGGCGCCAGC CCAATTTACC TGCTGGGTAA GTATTATTTA
GGTGTTAAAC CACTTTCAGC AGGTTATGAA ACTTATGTAG TTGAACCTTC ACTGGGAGGA
TTGGAATGGA TGGAAGGAAA GGTACCAACA CCATCGGGCG AGATCTCATT GTATTGCAGC
AAAAAAGAGA TCAGGATTAA AGCAGATGAA GGATCAGGTG TGTTAAGGTT TAAAAGTGTG
TCCAAGCCAG TTGTAAAAGG TGGTAAAGTA GTTGAAGTTG GCAAAAGGAC TTATGAACTT
AAATTGATGA AGGGTGTTCA GTACACGGTT AATTATCAGA AGTAA
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| Protein sequence | MKLIPNFLKT SMQQTVLLLL LALVCCADTV LAQQSGKASW IWYPGDLDIW VSNKMQNRRT
ERGAFLPPFW KMDSHYVLVE FHKEFNLANA EEVNLYVEGQ YNVKIDGQAF SGYPKKITVP
AGKHKLSLKV YGQDKVPAIL VQGKTVVSDE SWLATFEDKE WIDASGKASD KSGTTFVSAA
SWNLTDPLSP PSRFKLATTP MAAVKTDKVN NGFVADFGKE TFGFIKLHGL KGKGKLHIYY
GESKEEALSA DHCETLDLLE IDLKGKQDSV IELSKAFRYV NCQPEGNVTL DKVSMLYEYA
PVTEKGNFRC SDEQINKIYD ISKYTFHLNT REFFIDGIKR DRWVWSGDAY QSYLMNYYSF
NESPIVKRTL LAQRGKDPVT AHINTIMDYS FYWFLGIYDY YQYSGDQKFV QDIYPRMKSL
MDYVLGRRNK DGLLEWMPGD WIFIDWADKL SKDGEVSFEQ LLFCRSLETM ALCADMAKDT
EAAANYKKLA ADLKARIFKL YWDENKHALV HSRINGKPTD NVTRYANMFG IFFDYFSPSQ
KQEVKQHVLM NNKINKITTP YMRFYELEAL CAMGEQSYVL KQMKDYWGGM LELGATSFWE
EYNRDKKGVE HLAMYGRPFG KSLCHAWGAS PIYLLGKYYL GVKPLSAGYE TYVVEPSLGG
LEWMEGKVPT PSGEISLYCS KKEIRIKADE GSGVLRFKSV SKPVVKGGKV VEVGKRTYEL
KLMKGVQYTV NYQK
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