Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2753 |
Symbol | |
ID | 8253861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3254195 |
End bp | 3255427 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936401 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003093016 |
Protein GI | 255532644 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.501272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGG AAGCCATCAG GATAGCAGTG CGCAAATTTG CCCCTTTCGA GGCGGCTATG CAAAAGGTAT GGGATAGCTA TTGCATGTAT TCAGGTTGTA CCCTGCAGGC AGAACTGGTT CCGCTCGACC TGCATGAGCT ACATAAGGCT ACTTTGGGCA ATGATGGCCT GAAAAAAGGC GAATGGGACA TTGCCCACAT CAATACCGAC TGGCTGCTGG AAGGTTATGC CAGCGAGGCC TTTGAAATAC TGAACCCCCA CCTCGATGCC AATGCCCCCT CGGCTTTTCC GGAGGGCTGG AGTCCGTCAT TGCTGGCTTT ACAGCAATTT GAAGAACAGG TGGTAGGTTT GCCCTTTCAT GATGGTCCGG AATGCCTGAG CTACAGAAAA GACTTATTTG ACGATGTTGC AGAACAGCAA CGTTATCTGC AGCAATACAG AAGGGATTTG AAAATACCTG CAACATGGGA TGAATTCCGG CAGGTAGCCA GTTTTTTTTA CCGTCCGGAA CAAAACCTCT ATGGCAGTGT ATTTGCGTGC TATCCTGATG GGCACAATAC GGTGTTTGAT TTCTGCCTGC AATTGTGGAG CCGGGGCGGG ACATTGCTCG ATGAAGAAGG AAAAATAAAT ATTGATACCA AAGCCGCTGC TGAAGGGCTT GATTTTTATC GTCAGCTGCT GAAAGACACA AAAGCTGTAC ACCCTGGTTC GGCAAACTAC GATTCTGTAC AGGCCGGACA GGCTTTTGCC AGAGGTGAAG CTGCACTGAT GATCAACTGG TTTGGTTTTG CATCGGTATG CGAGGTAGAT GCCGCTTCGG CAGTGAAAGG CAAAGTAGGG GTAACTTCAT TGCCGGTTTC GGAAAATAAC CTGCCGGCTT CGTTAAATGT TTATTGGGTA TATACCATAG GCTCGGGTAG TAAACATAAG CAAACTGCTT ATGATTTTCT CCGTTTCGCA GTAAATGAGG AGAACGATAA GCAGTTGACG CTGGAAGGTG GAATTGGCTG CCGGATTTCA ACCTGGAAAG ATAGCCTGGT GAACGAGCTG GTACCTTATT ACCATAAACT GGAACAATTG CATAAAGGGG CAAAAACACT TCCGCAAAAA AGCAATTGGG CAGAAATTGC AGCGATTATT GATGTGGCGG TATTAAAGGC CTTAAACAGC GAGCTACCTG CTGCAGAAAT TTTGCGCCTC GCCCAGGAAC AGATCATTTT AATTGACAAA TAG
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Protein sequence | MNKEAIRIAV RKFAPFEAAM QKVWDSYCMY SGCTLQAELV PLDLHELHKA TLGNDGLKKG EWDIAHINTD WLLEGYASEA FEILNPHLDA NAPSAFPEGW SPSLLALQQF EEQVVGLPFH DGPECLSYRK DLFDDVAEQQ RYLQQYRRDL KIPATWDEFR QVASFFYRPE QNLYGSVFAC YPDGHNTVFD FCLQLWSRGG TLLDEEGKIN IDTKAAAEGL DFYRQLLKDT KAVHPGSANY DSVQAGQAFA RGEAALMINW FGFASVCEVD AASAVKGKVG VTSLPVSENN LPASLNVYWV YTIGSGSKHK QTAYDFLRFA VNEENDKQLT LEGGIGCRIS TWKDSLVNEL VPYYHKLEQL HKGAKTLPQK SNWAEIAAII DVAVLKALNS ELPAAEILRL AQEQIILIDK
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