Gene Phep_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2464 
Symbol 
ID8253571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2858757 
End bp2859920 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content46% 
IMG OID644936114 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003092730 
Protein GI255532358 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTA ACACAAAACA TCGTTTCTTT TTAAGTCTGT TTTTCTTTAT GTCGGGCTTA 
AGTTTTTCTA CCTGGGCTTC GCGGATCCCG ACCATTAAAA CTACTTTTGG TTTCAATGAG
GCCGAGCTGG GCAGTATATT GCTGGCCCTG CCCATAGGTT CCCTGCTGGG CCTGCCCATT
TCGGGCTGGC TGGTGTCCAA ATACAACAGC CGCGGACCTT TAACGCTGGG CTACGGACTC
AACATGCTGG CGCTTACGCT TATTGGTTTT GCACACAATA CCTTAAGCCT GGTTTTGGCC
GTAGTGGTAT TTGCCTTTAC CACCCGTATC TTTAATATTT CTGTAAACAC CCAGGCCTTA
ACCCTGCAAA AGCGTTTCGA TAAAAAGATC ATGGGTTCTT TTCATGGTTA CTGGAGCATG
GGTGGCATAG CAGGAATCCT GCTGTCTACA CTTTTGCTCA GTTTCAATGT ACCCATCCAG
ATTCATTTTA CGGCTGTAGC CATTGTGATG CTGTCGCTTA GCCTATATGC TTACCAGTAT
TTGCTGAAGG GAGACCGCTC CGAAACCGGT AACAAGCTCA TTTTGAGCAA GCCAGATCCC
TATATTTTTT ACCTGGGCCT GGTGGTTTTC CTTTGTGCCA TCTGTGAAGG GGGGATGTTC
GACTGGAGCG GTATCTATTT CCAGGAAATT ATAAAAGTAG AGATCTTTAC CTATGGTTAC
CTGATCTTCA TGACCTTTAT GGCCACTTCC AGATTTTTAT CCGATTTCAT TGTGGCACGC
TTTGGCATGC CAAAAACCTA TATCATGAGC GCAAGCTGTA TTGTTTCGGG CATTTGTCTG
GCCATTATTT TTCCGTATTT CTGGACGGCT ATGGTCGGCT TTTCGCTGGT AGGTTTTGGT
ACCGCGGCTG TAATCCCGAT GTCTTACGCC CTGGCCGGTG CTTCAAAAAA ATATTCGGCA
GGTATGGCCA TATCCATCAT TGCCACCTAT TCCATTACGG GGATGTTGCT TGGCCCGCCT
TTAATTGGCT ATCTGGCCCA TGCCTTCAAT TTAAGGGTGT CTTTTGTCAT TTTTGCCCTG
TGCGGGATAT TGCTGATCCC CATTACACAG CTATTTTTTA AACACCAAAG GCTTTCAGAT
CAAAGCGTTA AGCCATTGAG CTGA
 
Protein sequence
MISNTKHRFF LSLFFFMSGL SFSTWASRIP TIKTTFGFNE AELGSILLAL PIGSLLGLPI 
SGWLVSKYNS RGPLTLGYGL NMLALTLIGF AHNTLSLVLA VVVFAFTTRI FNISVNTQAL
TLQKRFDKKI MGSFHGYWSM GGIAGILLST LLLSFNVPIQ IHFTAVAIVM LSLSLYAYQY
LLKGDRSETG NKLILSKPDP YIFYLGLVVF LCAICEGGMF DWSGIYFQEI IKVEIFTYGY
LIFMTFMATS RFLSDFIVAR FGMPKTYIMS ASCIVSGICL AIIFPYFWTA MVGFSLVGFG
TAAVIPMSYA LAGASKKYSA GMAISIIATY SITGMLLGPP LIGYLAHAFN LRVSFVIFAL
CGILLIPITQ LFFKHQRLSD QSVKPLS