Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2348 |
Symbol | |
ID | 8253454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2742847 |
End bp | 2743611 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935997 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003092614 |
Protein GI | 255532242 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.199031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA GCAGCAAGAT TGCCCTGGTT ACTGGTGGAA GCCGTGGTTT GGGAAGAAAT ATAGCTTTGG CTATTGCTAA AAAGGGACTG GATGTTATGA TTACCTACAA CAGCAATAAG GAAGCTGCAG ATGAAGTGGT AGCGGCCATT GAAAAAACCG GACAAAAAGC GAAAGCTTTT CAGCTGGATA CCAGCAACAC AAGACTTTTT GACGGTTTTA TAAATGAGTT GACCGCTTAC CTGAATCAAA CTTACGAAAA TCCAAACCTC GACTTCTTGG TCAACAATGC AGGAACAGCC TTGTATGCCC CGGCAACAGA TACTACAGAA GAACAATTGG ATGCCATTTT TAATATCCAT TACAAAGGAG TGTTTTTTTT AATTCAGAAA ATATTGCCTT TTATCAATGA GGGGGGTGGA ATTGTAAACA TATCTTCCGG ACTTACACGA ATTACTATGC CGGGATCTTC TGTGTATGGT TCTTTGAAAG CTGCAGTGGA AACGCTTACA AGATATTTGG CTAAAGAACT GGGACCAAAG AAAATACGTG TCAATGTGTT GGCTCCCGGT GCTATTGAAA CTGATTTCGG CGGCGGTCGT GTTCGGGACA ATAAAGATAT AAACGAGCAA ATTGCCGGTT TTACAGCTTT GGGGCGTGTT GGTGTGCCGG ATGATATTGG GGGTGTTGTT GCCTTTTTGT GTAGTGATGA GGCCGGTTGG ATCAATGGTC AACGTATAGA AGTTTCCGGC GGACAAGCCT TATAA
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Protein sequence | MKTSSKIALV TGGSRGLGRN IALAIAKKGL DVMITYNSNK EAADEVVAAI EKTGQKAKAF QLDTSNTRLF DGFINELTAY LNQTYENPNL DFLVNNAGTA LYAPATDTTE EQLDAIFNIH YKGVFFLIQK ILPFINEGGG IVNISSGLTR ITMPGSSVYG SLKAAVETLT RYLAKELGPK KIRVNVLAPG AIETDFGGGR VRDNKDINEQ IAGFTALGRV GVPDDIGGVV AFLCSDEAGW INGQRIEVSG GQAL
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