| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2237 |
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| Symbol | |
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| ID | 8253343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2589552 |
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| End bp | 2590601 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935886 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003092503 |
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| Protein GI | 255532131 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.572744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.998954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCA CCTTAAGCGG ATATACCGCT GCAGATGAGG GTAAAAATGA ATTACCGGAT
ACCTTAAAAG GGATGTTTAA AAACCCGATA GCAGCGGGGG CAGATCCCTG GGTAATTAAA
TCGGGAAAAT ATTATTATAC CTGCCTGAGC AACGGGAACG TGGACAGTAA AGGGATTTCG
GTTTGCAGAT CACTGAAACT TACGGAGCCC GGCAGCAAAA TAACAGTATG GACAGCCCCG
GATACCGGCT GGAATTCGAC CCAGATCTGG GCTCCTGAAC TGCATCACAT GAACAACAGG
TGGTATATTT ATTATGCCGC GGGCAGAAAA AAGGGAGCGC CGTATATCCA TCAGCGCTCT
GGTGTACTGG AATCGGTTTC TGATGATCCG CAGGGACAAT ATATAGACCG GGGATTATTA
CAGACAGGTG TAGATAAGAA TGATCCGAGT GGTACGATAT GGGCAATTGA TGTAAATGTA
GCCAGTATAA AGGGCAAACT CTATGCAGTA TGGTCAGGAT GGGAAAAAAA TATGGATACA
GATAAAACAT CGCAGCAGCT TTATATTGCA GAGATGAGCA ATCCCTGGAC GATCAGTTCA
AAACGGGTTA AACTATCGGG CCCCGACCAG CCATGGGAAC AGGGAGGCCC TTTGAACCTG
AACGAAGGCC CCGAGTTTTT ACTGCATAAG GGACAGGTTT TTATCATTTA CTCTACCCGT
GAATCCTGGA CACCTGAATA CAGACTTGGA CAGCTCCGTT TAAAGGATCC GGCCAGATCA
CTCCTGGATG CTGCCAACTG GCTGAAATCC GGTCCTGTAT TTCAGGGTAC CCAGACAGTT
CATGGCACGG GGCATGCGAG TTTTACCACT TCGCCAGACG GGAAGGAATG GTGGATGATT
TACCATACCA AGCGTAGCAC AAAGCCGGGC TGGGAACGTG ATATCATGAT GCAAAAGTTT
AAATGGGACA AAGATGGCAA CCCGGATTTT GGAAAACCGG AGCCAGCAGG CAAACTGTTG
AAAAAGCCTT CGGGAGAAGA GGGGGGATAA
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| Protein sequence | MLATLSGYTA ADEGKNELPD TLKGMFKNPI AAGADPWVIK SGKYYYTCLS NGNVDSKGIS
VCRSLKLTEP GSKITVWTAP DTGWNSTQIW APELHHMNNR WYIYYAAGRK KGAPYIHQRS
GVLESVSDDP QGQYIDRGLL QTGVDKNDPS GTIWAIDVNV ASIKGKLYAV WSGWEKNMDT
DKTSQQLYIA EMSNPWTISS KRVKLSGPDQ PWEQGGPLNL NEGPEFLLHK GQVFIIYSTR
ESWTPEYRLG QLRLKDPARS LLDAANWLKS GPVFQGTQTV HGTGHASFTT SPDGKEWWMI
YHTKRSTKPG WERDIMMQKF KWDKDGNPDF GKPEPAGKLL KKPSGEEGG
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