Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2166 |
Symbol | |
ID | 8253272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2490723 |
End bp | 2492882 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935815 |
Product | protein of unknown function DUF893 YccS/YhfK |
Protein accession | YP_003092432 |
Protein GI | 255532060 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0513514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.798484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAATC GTCCCGTCAG AAGTATTCAT GATTTTTTAT TAAGTACTTA TTTCGCTGAT GGTCTTCGCA TTACACTTGG CGTACTCTGT CCTTCATTGA TATTTGCACA ATTCGGTCTC CTCCAGTACG GCATGACAGT TTCACTGGGT GCATTATGCG CCAGTGTGGT AGATTCGCCG GGCCCAATTG TGCACCGCAG AAACGCAATG CTGATTACCA CTGCGCTGAT CACCTTGATC TTTATCGTTG TAGGTTTAAC CAACAGTAAT ATATATTTCA CCGCAATCCT CATTGTGCTG TTCAGTTTTG TCTTTTCGAT GTTCTTTCTA TATGGTCTCC GGGCCGCCTC AATTGGTACA TCAGCCTTAC TGATCATGGT TTTAAGTATA GACGATATCC GTCCATGGCA GGAAGTACTT TTTTCGTCGG GCCTTATTTT TCTGGGCAGT ATCTGGTATA CCGGACTGAG CTATTTTTTT TACAGGATAC GCCCCTATCG GCTGGTTCAG CAAACATTGA GTGATTCCAT CCATGAAGTC AGTCTTTTTT TAAGGGCAAA AGCCAGGTTT TATCACAAAA ATATTGATTA TGACGATAAT TATGCCGAGC TCCTGCAGCT GCAGGTTCTT GTACATGAAA AACAGGATGC CGTTAGGGAA GTTTTGTTTA AAACCCGGGA AATTGTAAGG GATTCTACCC CTGAAGGCCG CTTTCTCCTA TTGGTTTTTG TCGACATGGT CGACCTTTTT GAACAGGTAA TGTCTACCTA TTACAACTAT AAACAATTGC ATGAGCAATT CGATTCTTCC GGCATTTTAA GGCATTATGA AGCGGTGATC AAAAAAATAG CAGATGAACT GGATGATATT GCGTTCGCTT TAAAAACCGG GGGCACGCCC AGTCTGCCAA CTTCGCTGAT CAGGGACGTA GAAAGGTTAA AAAACCAGAT TACCTGGCTC GAACGTAAAA ATACAGATGG AAAATACAGT ACACTGGGTA TTATCGCCTT AAAAAACATA GAAGTTAACA TAGAGAACAT CCTGTCCCGT GTAAAGACCA TCAATAGTTA TTTCAATAAA AAAGAAAAGA AAAATCTCAA AGCCAGGGAA ATAGAAATAG AGAAATTCGT GACCAGGCAA AGCATCGACC CAAAATTGTT ATATGAAAAT ATAACATTCA ACTCTTCTAC ATTCAGGCAT TCCCTCCGTG TGGCCATTGT CATGCTTATC GGCTTCATTG TCGCCAAAAC GCTGAACCTT TCCCATAGCT ACTGGATCCT GCTTACCATC CTTGTCATCT CAAAACCTGG TTTTAGTTTA ACCAAACAAC GCAATTATGA ACGGATCATC GGTACTGTGG TCGGCGCATT TATCGGAATG GGCATCCTTG TATATGTTCA GGATAAAAAT ACGCTGTTTG TTATCCTGCT CTTCTGCATG ATTGGGGCCT ATAGTTTCCA GCGTAAAAAT TACGTGGTCA GCGTACTGTT CATGACTCCC TATATCCTGG TCCTGTTTGA TTTCCTTGGC ATGGGAAGTC TGTCCATTGC CAGAGAAAGA ATCTATGATA CCCTGATCGG TTCCGGTATT GCCTTGCTGG CCAGTTATTC ATTGTTTCCC AACTGGGAAC ATGAAAAGCT TAAAGAAGCC ATGCTGGATA CACTGAAAGC AAACATAAAG TATTTTGAAG AAGTTGTACT GTTGTATATT GATGAAGTAC ATAACCTCAC CAATTACAAA GTAGCCCGTA AAGAAGTGTA TGTAGCAACG GCCAATCTGG CCTCGCTTTT TCAACGCATG TTTTCAGAGC CTAAAAGTAA ACAGTTGATG ATCAAAGAGC TGCACCAGTT TACTGCCTTA AACCATCTTT TCTCTTCCTA CATTGCAACA TTATCACTGT ATAAAAAAGA ACATGCTTTT ATAGTCGCTA ATTTTGACGA CCTGAAACCT ATAGTTCAAA ATACCACATA CCTTTTAAAT CTGGCTACAG AAAATTTGTT GTCCAACAAG GAACAAACCA GTAATGTACC GCTCATCCGG ACAAATATAA GTACCCTGAA ACAAACCTCT CAGGATGAGG TTATTATTTC TGAACAGATA GACCTGATCC AAAAAGTAGC CTACGATATC TTTAAGCTAT CCGAAAAAAT TAAAATATAA
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Protein sequence | MFNRPVRSIH DFLLSTYFAD GLRITLGVLC PSLIFAQFGL LQYGMTVSLG ALCASVVDSP GPIVHRRNAM LITTALITLI FIVVGLTNSN IYFTAILIVL FSFVFSMFFL YGLRAASIGT SALLIMVLSI DDIRPWQEVL FSSGLIFLGS IWYTGLSYFF YRIRPYRLVQ QTLSDSIHEV SLFLRAKARF YHKNIDYDDN YAELLQLQVL VHEKQDAVRE VLFKTREIVR DSTPEGRFLL LVFVDMVDLF EQVMSTYYNY KQLHEQFDSS GILRHYEAVI KKIADELDDI AFALKTGGTP SLPTSLIRDV ERLKNQITWL ERKNTDGKYS TLGIIALKNI EVNIENILSR VKTINSYFNK KEKKNLKARE IEIEKFVTRQ SIDPKLLYEN ITFNSSTFRH SLRVAIVMLI GFIVAKTLNL SHSYWILLTI LVISKPGFSL TKQRNYERII GTVVGAFIGM GILVYVQDKN TLFVILLFCM IGAYSFQRKN YVVSVLFMTP YILVLFDFLG MGSLSIARER IYDTLIGSGI ALLASYSLFP NWEHEKLKEA MLDTLKANIK YFEEVVLLYI DEVHNLTNYK VARKEVYVAT ANLASLFQRM FSEPKSKQLM IKELHQFTAL NHLFSSYIAT LSLYKKEHAF IVANFDDLKP IVQNTTYLLN LATENLLSNK EQTSNVPLIR TNISTLKQTS QDEVIISEQI DLIQKVAYDI FKLSEKIKI
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