Gene Phep_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1853 
Symbol 
ID8252957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2142853 
End bp2143131 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content34% 
IMG OID644935504 
Productribosomal protein S15 
Protein accessionYP_003092123 
Protein GI255531751 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.601091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.224539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTAA GTAAAGAAGT AAAAGCCGAT ATTTTTAAAA AACACGGCGA AGTAGAAACA 
AACACGGGTT CTGCAGAAGG TCAGGTAGCG TTATTTACAT ATCGTATTGC GCACTTAACA
GAGCATTTAA AGAAAAATCG TAAAGATTTC TCTACTCAGT TAGCACTACA AAAATTAGTA
GGTAAACGCC GTGGTATTTT GGCTTACCTG TTTAAAAAAG ATATTGAGCG TTATCGTGCT
ATCATCAAGA ACTTAGGTTT AAGGGATATC ATTAAATAA
 
Protein sequence
MYLSKEVKAD IFKKHGEVET NTGSAEGQVA LFTYRIAHLT EHLKKNRKDF STQLALQKLV 
GKRRGILAYL FKKDIERYRA IIKNLGLRDI IK