| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1828 |
|---|
| Symbol | |
|---|
| ID | 8252931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2121525 |
|---|
| End bp | 2122580 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644935478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092098 |
|---|
| Protein GI | 255531726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000118361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000000100515 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA TGAAAAAATT CTACTACTTA CTGATCATTG TTGCTGTACT TTCATCTTTA
CCTATTCTGT ATTTAACCAT CCGCTATGCG CTTAAACAGC GTGCGGCTAC TTATAACTTT
AAAAGGAAGC TGCTTGGGCT GGTTAAAGGC CATAAGGCCA TCGATATAAA ATACAATTCG
TATTACCTGG CCGGTGAGGC CGGAAGTTCC GTTTACCTGG CCAGCGGAAC GGCCATAGGC
CATTTGCTGA AGGTTGGACC TTTGTTAAGG GATACGGTAA GCATTCGCCT TGAGCTGAAC
AGACAGGAGG TAAAGTTAAA GGGCAGTTAT AAGGCTTATG TAGATTCCGG TTCTTTTTAC
CTGTACAATG GATTGGAACG CAGCATCCTG AAAGGCAGTA CTGGTGTTTG GAAGGCAGCA
GTTTATAATA TAAAAGCACC ATACTTTGCA CAGCTGCAGC CCCTGGGCAC ACAAACGATG
GTTTTCCGTT TTATAGACAC CGATACCCGG GCGAATAGTT TGCGCAAAGT GCGTGTGCCA
GGAGAAAGCA TGAGCAATAC CGGGATATTT GAGAAGCAGG TAGATGGCCT GTTTTGTACG
GATGGCATGC TGAGGTATAA CCGGCAGTTG CACATGCTGA CCTATGTGTA CCATTACCGC
AACGAGATCT TGCTGATAGA TACCAACTTG AACCTGGTAA AGAAAATAAA GACCTTAGAC
CCGATTGATT CGGCCCGCTT TAAGGTAGAC CAGCTGCGTG CTGAAAAGTC CTTCACTTTT
GCTTCGCCCA GCCTGATGGT AAATGCAAAC TGTTCAAACC AGGGCAAATA TTTGTTTGTG
CAATCGAAAC TGATGGGTAA GGACGAGGAT TTGACGCTGT TCAGGAAAAG TGCGGCAATA
GATGTGTACG ATCTGGAGAA ACAGGTATAC TGTTATTCGT TTTACCTGCC CAAATATAAA
GAGGTACCCA TAAGTAGTTT TAAGGTATTG GGGAACAGTT TGTATGCAGT GGCAGGGCAA
TACCTGACCA GGTATGCGCT GGAATTGCCG GAGTGA
|
|---|
| Protein sequence | MKSMKKFYYL LIIVAVLSSL PILYLTIRYA LKQRAATYNF KRKLLGLVKG HKAIDIKYNS
YYLAGEAGSS VYLASGTAIG HLLKVGPLLR DTVSIRLELN RQEVKLKGSY KAYVDSGSFY
LYNGLERSIL KGSTGVWKAA VYNIKAPYFA QLQPLGTQTM VFRFIDTDTR ANSLRKVRVP
GESMSNTGIF EKQVDGLFCT DGMLRYNRQL HMLTYVYHYR NEILLIDTNL NLVKKIKTLD
PIDSARFKVD QLRAEKSFTF ASPSLMVNAN CSNQGKYLFV QSKLMGKDED LTLFRKSAAI
DVYDLEKQVY CYSFYLPKYK EVPISSFKVL GNSLYAVAGQ YLTRYALELP E
|
|---|
| |