| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1427 |
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| Symbol | |
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| ID | 8252527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1693616 |
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| End bp | 1696426 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935080 |
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| Product | hypothetical protein |
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| Protein accession | YP_003091703 |
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| Protein GI | 255531331 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAA AAAACAACAA TAAATCATTG ACAATCAGTT TAAAAATAAC ATTAATATTA
AGTTTTATTT CATATCCTGT TTTTTCACAG ATTTTCAATG CAGAACAAAA CCCACTTAGT
GTAAAATGGC GTCAGATTCA AGCTTCCGGA TTTAAAGTCA TCTATCCCCG GGAGCTGGAA
AAAGAGGCCC AGAGAATGGC CAATACCCTA CCTCACATTT ACCCTTATGT AGGGGGCAGT
TTGGGCCGGC AAAAAACAAG CATTCCGGTA CTCCTCCAAA ACCGTGGGGT AGTGTCAAAC
GGCTTCGTTC AGCTGGGCCC AAAAAAGTCG GAATTTTATA CCACCCCTCC GCAGCAGTTC
GACAGTCAGG ACTGGCTGAA CAACCTTGCT GTACACGAGC TCCGGCACGT GGCCCAGTTC
GACAAACTAA CCGGCGGGAA GGCCCACCCT TTTCCGGAAG AAGTTCACCT CGCCTGGTTC
GGGGCAAGTA TCCCGATCTG GTTTTTTGAA GGCGATGCCG TGAGCACTGA AACTTCACTG
ACCAATGCCG GCCGGGGAAG ACAGCCTTCA TGGATCATGC CTTACCGGGC AGCCCTGCTG
GAAGGCAAAA ACTTTTCTTA CAGCAAAGCC AGTTTCGGCT CCGACAAAGA CATCACGCCC
GGCTATTATC AATTGGGCTA CCTCATGGCC TCCAACATCA GAAAGCAGGA GGGTAAATAT
ATTTTCGATA GTGTGCTTAC CGATATCCGC CGCCGCCCTT TCCGCCTCTA CCCTTTTTCC
AATACCCTTA AAAAATTTAC AGGCAAAGGA AGCCACCAAT GGTTTAAGCA AACCAACAGC
CTGCTGAAAG AAAAATGGAC AGCACAGGCC GAAAAATCCC ATACAGAAAA TTACAGCGCA
CTAAACAAAC CGTCCAGCTA CGCCAGTAAC TACTTTCTTC CGGTAAGATT AACAGCAAAC
ACCATATTAA CTTTAAAGCA AAGTAAAGCC GATGTTCCTC AGTTTACGGT TATAGGCAAA
GACCGGAAAG AAACCAGATT GCTGAACATT GGTCCGCAGG AACAACCATG GTACAGTTAT
GCCAACGGAC TTATTGTTTG GGATGAGATC CGGTATGATC CAAGGTACCG TCAGCGCAGT
TACAGTGTAA TCTGCAGCTA CGATATGAAA TACAAGCTTG TCAAAAAGTT AAGCAGTAAA
AGCAGGCTCT TCTCGCCTTC CCTTTCTGCT GATGGTAAAA AAATAATAGC AGTCAGGTTT
GACCTGAGCA ACCAGTGCAA TCTGGTTGAG CTGGATGCAG GCAATGGAAA ACTGTTGTAC
ACCTATCCAA ATCCGGAAAA CCTGATCCTG CAAACCCCTT CTTTCAGTGA AGATGGCCAT
ACAGTTACCT ACATCAGTGT CAGCGAGCAG GGCAAGGCCT TATGGACCAG CAACAGGTCG
GGACAAACCA GACAACTGAT CGCCCCATCG CAACAGCAGA TCACAAGGCC CATATTCATT
GACCAGCAAA TCGCATTTAA CGCGCATTAC AGCGGAGTTG ACAATATTTA CAGCGTAGAC
ATCCAATCAA AGAAAATAAG CGCACTGAGC GACGCAAAAT ACGGTGCGTT CAATCCGTCA
TTCAGCAAAA GTTCATCCAC CGTAATTTTT AACAATTATA TGCCCGGAGG GTATGAAGTT
GCCGAAATGT CTTTGAAGGC CCTTCGGCCA GAAAAAAATA ATTTTGTCTA TTTCGGTGAA
CCTGCCCAGA AACAGGAAAA TACCGGCAAT GTATTTTCAA AAATTCCCGA CAGCACTTAC
ACGTCCAGGC CTTACGCAGC CCTGGGAAAT TTATTTAATG TACACAGCGT GATCCCGATC
ATTGAAGATG AATACCAGTT CGGATTACAG CTCAACTCAG ACAACCTGCT CAATACCCTG
AGCGCCTTTG CCGGAGCGGA ATACCACCGT GACCTGGACC GTTTTGAATA CAATGTCGGA
TTTAGTTTGA AAAGCTTTTA TCCCATTATC AGCACTACTT ATCGCAACAG GCCAAGAAGA
ACATTTTACA GTACAAACAA GGGTATATAT CAGGGCGACT GGCGTGAGCA CAATATTCAG
CTGCAGGCCT TGCTGCCCAT TAACCTGAAC GCCCTGGGCG ATACTTACAG TTTGTCGTTA
AAAACAGCTA CCAGCTTTAC CCAGCGGTAC GCTGCCCAGA ACATGCCCGG AAACTACATC
TCCGTACTCC GGTTTCCTAT GGAATATGGA TTTACCTTTA CCCACGCTAT GCGGCAGGCC
GAACGCGATA TTGCCCCAAA ATGGGCACAG ATCTTAAGGT TTACCTATCA GCACCAGCCT
TTTGACAAAC AGCTGGACGG TCGCCTGTTT GCTGCAGAGG GTTTTCTTTA CTTTCCCGGA
TTTTTCAGGA ACCATTCCTT TCTGGCCAAT TTTAATTATC AAACCGCCAC CGGAGTAAGA
AAGTACGACA GGGAAATTAA CGCCGTATAC GGCTATAACA ACATCAGGGC AACAAGTATG
CTCAAAAACA CCTTATTGTT CAATTACAGG TTCCCTATTG CCTTCCCCGA TGCAGAACTT
GGCCCTGTTG CTTATTTTAG AAATTTCAGG GGCGGCTTAT TTTGTCATTA TGAGAACATA
GGTGCGGGCA CTACCTTGTC CGAACCCAAG ACATACGGGT TTGAACTGCA TACCAGCATG
AACGTACTCC GTTACCAACC CATCGTAGAT TTAGGGGCCA GATGTGTATT TGTAAACAAA
ACTTATCACC AAAACCCTAT ATTAGAGTTA ATTTTAAACT ACAGTTTTTA A
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| Protein sequence | MNQKNNNKSL TISLKITLIL SFISYPVFSQ IFNAEQNPLS VKWRQIQASG FKVIYPRELE
KEAQRMANTL PHIYPYVGGS LGRQKTSIPV LLQNRGVVSN GFVQLGPKKS EFYTTPPQQF
DSQDWLNNLA VHELRHVAQF DKLTGGKAHP FPEEVHLAWF GASIPIWFFE GDAVSTETSL
TNAGRGRQPS WIMPYRAALL EGKNFSYSKA SFGSDKDITP GYYQLGYLMA SNIRKQEGKY
IFDSVLTDIR RRPFRLYPFS NTLKKFTGKG SHQWFKQTNS LLKEKWTAQA EKSHTENYSA
LNKPSSYASN YFLPVRLTAN TILTLKQSKA DVPQFTVIGK DRKETRLLNI GPQEQPWYSY
ANGLIVWDEI RYDPRYRQRS YSVICSYDMK YKLVKKLSSK SRLFSPSLSA DGKKIIAVRF
DLSNQCNLVE LDAGNGKLLY TYPNPENLIL QTPSFSEDGH TVTYISVSEQ GKALWTSNRS
GQTRQLIAPS QQQITRPIFI DQQIAFNAHY SGVDNIYSVD IQSKKISALS DAKYGAFNPS
FSKSSSTVIF NNYMPGGYEV AEMSLKALRP EKNNFVYFGE PAQKQENTGN VFSKIPDSTY
TSRPYAALGN LFNVHSVIPI IEDEYQFGLQ LNSDNLLNTL SAFAGAEYHR DLDRFEYNVG
FSLKSFYPII STTYRNRPRR TFYSTNKGIY QGDWREHNIQ LQALLPINLN ALGDTYSLSL
KTATSFTQRY AAQNMPGNYI SVLRFPMEYG FTFTHAMRQA ERDIAPKWAQ ILRFTYQHQP
FDKQLDGRLF AAEGFLYFPG FFRNHSFLAN FNYQTATGVR KYDREINAVY GYNNIRATSM
LKNTLLFNYR FPIAFPDAEL GPVAYFRNFR GGLFCHYENI GAGTTLSEPK TYGFELHTSM
NVLRYQPIVD LGARCVFVNK TYHQNPILEL ILNYSF
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