| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0950 |
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| Symbol | |
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| ID | 8252044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1105083 |
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| End bp | 1108682 |
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| Gene Length | 3600 bp |
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| Protein Length | 1199 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934605 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091234 |
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| Protein GI | 255530862 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00543932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.368502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAT TTTACTATAC AAATGGGTAT GGTGTAACCA GCTATATCCG AAAGTCCATG
GCTAGTCTGT GGCAGATTAC ATGGAATCCC AATATCAGAA AATGGCTTAT GAGGATAAAC
CTGACATGGT TGATGTTATT GATAGCGTTT ATGCAGGTTT CTTTGGCCGC TAAAGCTCAA
AAAATCTCTT TGTCCAAAAA GAATGCACCA CTTACAGAAA TCTTTAAAGA ACTAAGGAAA
CAAAGCGGTT ATGATTTCGT GATCAACAAG GATCAGATCA AGATTGCAAA ACCGGTATCC
CTTTCAGTAA ATGATGATGA TTTGGTAAAT GTGTTAACAA AATGCTTTGA AAATCAGCCA
TTCACTTATT TGATGGAGGA TAAGATGATC ATAGTGGTTA ATAAAAAACC TGAAAAAGTT
AAGGTTGGTG TTCTACCGAT AGATGTAAAA GGACGATTGG TAGATGAAAA CGGGAGTCCG
TTGGTTGGGG CATCTATTTC TGTAAAGGGC AGTGAACGCA AAACAATAAC TAACGAAAAA
GGAGAATTTT CATTAACGAA TATAGATGAC CGAGCATTTT TGGTAATTTC ATTTGTTGGC
TACGAGGTGA AGGAAATTTC TGCAAAATCG GAATTAGGAA CGATAAAAAT GTTTGCAATT
GTGAGTGCCT TAGATGAAAT TCAAATTGTA AATACTGGAT ATCAAAAACT ACCTAAGGAG
CGGATGACAG GTTCATTTGT CTATGTTGAT AGAGAGTTAA TAGAAAGGTC TGTTAGTACT
AACATCCTTA CCCGTTTGCA GGATGTGGTT CCAGGCATGA TTTTCAACCG TAATCGTTCG
GCTTCAAACC TGTCAGGGGA AGGGAATATT TCAATTAGGG GACAAAGTAC AATTTTCGGT
AATACCCAGC CGCTGATTAT TTTAGATAAC TTTCCGTATG ATGGGGATTT GGCTAATATC
AATCCTAATG ACATTGAAAA TATCAGTGTG CTCAAGGATG CTGCAGCTTC TTCGATCTGG
GGAGCCCGTG CAGGTAATGG GGTTATCGTA TTGACAAGCA AACGGGCTAA GGCCGGACAG
GCTTTAGTCA TAGCTGCCAA CACGAATCTA AGCTATATCC CTCAGCCAAA CCTGTTGAAA
AACCAGAACA TGAGTTCCGG AGATTTTATT GACCTGGAAA AAATCTTGTT TTCCAGGGGA
TTTTACAATG GCGCTGAAAA CTCTGTTGTA AGAACTCCAT TAACCCCGGT AGTTGAGCTT
CTGATTTCTG AACGTGACGG GAAGATCAGC ACTGCAGATG CGGATAGGAT GATTCAGTCT
TTGAAAGGCT ACGACATCCG TGAGCAGTAT ATGCGATATA TGGGGAATTC TGTGATCAAC
CAGCAGTATG CAGTAAACGC TTCTGGGGAT GGTAATAACA ACAGCTATTA TCTTTCTATT
GGTTACGATC ATAACCGCCT ATCGGATAAG CTCAACTATG CAAAAAGGCT TAACATGAAC
TTTAACGACC GGTTGAGGTT CCTGGACAAC AAGTTAGAGG TCAGTGTTGG ATTGCTTTTG
ACCAGATCTA TCAATGAAAG GCCAAACAAT GGATTCAATG CCCTTAGCTG GAACCTAGGG
GATAAAGTTT ATCCATATGC AAGGCTTGTT GATCAGATGG GAAATCCAGC AGCTATCGTA
AAAGATTACC GTATGGCTTT TTCGCAGACA GCTCTGTCAT CTGGCTATCT AGACTGGGAG
TATCGTCCGG TAGAGGATAT GGAGGCAATT GAAAACCGTG CCCAGGCACT CGATTATAGG
ATCAACACTA ATGCTAAATA TAGAATCGCA ACATTCCTGG AGGCTGAGGC TGCTTTCCAA
TATGGACGCA ATAGCTGGCA GCAAAGGATG GTACAAGGCG CCGGCTCTTA TTATACACGC
AACCTAATCA ATAGGTTTAC GCAGATAGTG GCTGGGGGAA CCAATGTTTA TCCGGTTCCA
ATTGGCGCGA TACTGGACCA GTCGGTCAAC AATAGCGAAA GCTTTAATTT TCGTGGACAG
CTGAATTATA GGAAAACAAT CTCTGGGTTT GAAATTGCTG CACTTGGAGG TTATGAGTGG
CGGGACCTTA GCACTAGTGG ATATTCGAAT AGGTATTATG GCTATAATGA TGACATTGCA
CAAGTTGGTT CAGTAAATTA CGTAGGGGTT TATCCGGTAT CCTATTATTT GCCCGGATCA
AGCGGAACGG GCAGTATACC GGTGATGGAC GGGGTATCTG GAACAACTGA CAGGTTTTTA
TCGTTTTACT CCAATGCCTC AGTATCCTTT AAGTCAAAAT ACGTGTTATC CGGGAGCGCA
AGGTTGGACA GAAGTAATAT TTTTGGGGTA AACTCGAACC AAAAAGGAGT TCCTTTATGG
TCAGCTGGCC TGCTGTGGAA TCTTTCCAAG GAAGACTTCT ATGGTTCCTC TGGTTCTTCG
CTTTTCCCGA TGCTGAGCAT CAAGGCAAGT TTTGGTTATA ATGGGAATAT AGATAGGAAT
ACTTCTGCAT TTACAACAGC CTCTTATTTC AGCGGCTCTT CTGTACTTAC CCGACAGAAT
TATGCGGCGA TCATCAACCC GCCCAATCCA GATTTGCGAT GGGAAAGGGT AAAAGTGGCT
AACCTTGGTA TCGATTTCAT CGCTAAGGAT CATCGGATTT CGGGAACCTT GGAGTTTTAC
CGCAAGTCAG GGCTGGATCT GATCGGAGAA ATACCATATG CTCCATCTTC TGGCATTACC
TCATTTCGCG GCAATGTTGC CAATACGAGG GTTTCCGGGG TGGATTTATC TTTGAATACT
GTAAATACCA ATGGCAATTT TAAATGGACT ACCAGTTTTT GGGCCAGTTA TAACGACGAG
ATCGTTACCA AATACGTACC TGGTCCAAAT GCCAATGTCG GCAGTTATAC CCTGCAAGGG
GATGCTGGGA TCATACCGAT CAAAGGTTAT CCTTTGTATT CTATGTTCAG CTATAAATGG
GCCGGGTTAA ATCAGCTTGG TGATCCACAA GGCTTTTTAA AGGGAACGCC CAGCGCAGAC
TATACTTCAA TTTTTGCCGC CTCGACTCTA GATAATATTG TCTTCAGCGG ATCGGCAAAG
CCAAAGGCTT TTGGCTCGTT GATCAACAAT CTAAGTTTCA AGGGTTTTAA TTTTTCAGCA
AACCTGACCT ACAGGCTGGG GTATTATTTT AGAAGGAATT CTATTAATTA TTCCCAGGCT
CTTTCGGGAA AGGGTGGGCA CATGGATTTT TCAGCACGCT GGAAACAACC TGGCGATGAA
TCTTTGACCC AGATCCCGGC CCTGCCGTCA TCATCGAATA CCAATCGGGA TAATATGTAC
CTGTATAGCG ATGTTCTGGT AGAAAAAGGA GATCATATCA GGTTACAGGA CCTTAGGATG
GGCTATCAAT TTCCAAATAA ACTGCAGCAA AGGTTTGGGG TCAATCATAT GGAGGTATTT
ACCTATCTCT CAAACTTAGG CCTTATTTGG AGCGCAAATA AAAAGGATAT CGATCCTGAC
TATGTAAATG GGCTTGCTCC GGAAAAATCA TTTGCGATAG GCGTAAAATT CAATTTTTAG
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| Protein sequence | MYKFYYTNGY GVTSYIRKSM ASLWQITWNP NIRKWLMRIN LTWLMLLIAF MQVSLAAKAQ
KISLSKKNAP LTEIFKELRK QSGYDFVINK DQIKIAKPVS LSVNDDDLVN VLTKCFENQP
FTYLMEDKMI IVVNKKPEKV KVGVLPIDVK GRLVDENGSP LVGASISVKG SERKTITNEK
GEFSLTNIDD RAFLVISFVG YEVKEISAKS ELGTIKMFAI VSALDEIQIV NTGYQKLPKE
RMTGSFVYVD RELIERSVST NILTRLQDVV PGMIFNRNRS ASNLSGEGNI SIRGQSTIFG
NTQPLIILDN FPYDGDLANI NPNDIENISV LKDAAASSIW GARAGNGVIV LTSKRAKAGQ
ALVIAANTNL SYIPQPNLLK NQNMSSGDFI DLEKILFSRG FYNGAENSVV RTPLTPVVEL
LISERDGKIS TADADRMIQS LKGYDIREQY MRYMGNSVIN QQYAVNASGD GNNNSYYLSI
GYDHNRLSDK LNYAKRLNMN FNDRLRFLDN KLEVSVGLLL TRSINERPNN GFNALSWNLG
DKVYPYARLV DQMGNPAAIV KDYRMAFSQT ALSSGYLDWE YRPVEDMEAI ENRAQALDYR
INTNAKYRIA TFLEAEAAFQ YGRNSWQQRM VQGAGSYYTR NLINRFTQIV AGGTNVYPVP
IGAILDQSVN NSESFNFRGQ LNYRKTISGF EIAALGGYEW RDLSTSGYSN RYYGYNDDIA
QVGSVNYVGV YPVSYYLPGS SGTGSIPVMD GVSGTTDRFL SFYSNASVSF KSKYVLSGSA
RLDRSNIFGV NSNQKGVPLW SAGLLWNLSK EDFYGSSGSS LFPMLSIKAS FGYNGNIDRN
TSAFTTASYF SGSSVLTRQN YAAIINPPNP DLRWERVKVA NLGIDFIAKD HRISGTLEFY
RKSGLDLIGE IPYAPSSGIT SFRGNVANTR VSGVDLSLNT VNTNGNFKWT TSFWASYNDE
IVTKYVPGPN ANVGSYTLQG DAGIIPIKGY PLYSMFSYKW AGLNQLGDPQ GFLKGTPSAD
YTSIFAASTL DNIVFSGSAK PKAFGSLINN LSFKGFNFSA NLTYRLGYYF RRNSINYSQA
LSGKGGHMDF SARWKQPGDE SLTQIPALPS SSNTNRDNMY LYSDVLVEKG DHIRLQDLRM
GYQFPNKLQQ RFGVNHMEVF TYLSNLGLIW SANKKDIDPD YVNGLAPEKS FAIGVKFNF
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