Gene Phep_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0819 
SymbolrpsT 
ID8251908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp969324 
End bp969578 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content33% 
IMG OID644934469 
Product30S ribosomal protein S20 
Protein accessionYP_003091103 
Protein GI255530731 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATC ATAAATCTTC ACTAAAAAGA ATTAGAGCTA ACGCAGCTAA ACGTTTACGT 
AACAGGTATC AGGCAAAAAC AACGCGTACG TTTATCAAAA GATTGCGTGC TGCAGAAGAT
AAAAAAACAG GATTAGAATT ACTTCCTAAA GTAGTTTCTA TGCTGGATCG TTTGGCCAAA
AAGAATGTGA TCCATAAAAA CAAAGCAGCT AACAATAAAT CTAAGCTGAC TAAATTTGTT
AATGGCTTAA AATAA
 
Protein sequence
MANHKSSLKR IRANAAKRLR NRYQAKTTRT FIKRLRAAED KKTGLELLPK VVSMLDRLAK 
KNVIHKNKAA NNKSKLTKFV NGLK