Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0546 |
Symbol | |
ID | 8251633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 652520 |
End bp | 653026 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644934196 |
Product | NGN domain protein |
Protein accession | YP_003090832 |
Protein GI | 255530460 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00381555 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAACG CTCAACAAGA AAAAAACTGG TATGTTGTGG TTACGTACCC GAATCTGGAA AGAAAAGCTC TTTTAAACTT ATTAAAAAAC AATTTTATTG CCTTTTTACC CTTGCAAAAG GTGCAAAGAA AATGGAGTGA CAGGAAAAAA ACTATAGAAA TTCCGTTGTT CCCTAATTAT TTGTTTATCA ACATAAATGA AAAAGACCGG TTCGAGGCGC TAGATATTTA TGGAGTAAAA CGCTATGTCA CTTTCGGTGG TCGTCCGGCT TTTATTTCAG AAACAGACAT ATTAAATATT AAAAGAATTG TGGAGAGTGT TGATTTGTAT ATTGAGCACT CTTTAGTGAA AGGAGACGCG GTTAAAATAA TTGGAGGGCC TTTTAAAGAT ATGATTGGGA TTTTGTTTAA AAAAAGCGGT CAAGCCAGAT TTGGAATCAG GGTAGAATCG ATGAATCAAA CACTTTCTAT TGAAATATGT CATACTTTAA TTAGAAAGGT TTTTTAA
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Protein sequence | MENAQQEKNW YVVVTYPNLE RKALLNLLKN NFIAFLPLQK VQRKWSDRKK TIEIPLFPNY LFININEKDR FEALDIYGVK RYVTFGGRPA FISETDILNI KRIVESVDLY IEHSLVKGDA VKIIGGPFKD MIGILFKKSG QARFGIRVES MNQTLSIEIC HTLIRKVF
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