Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0513 |
Symbol | |
ID | 8251600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 620807 |
End bp | 621685 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644934163 |
Product | lipoyl synthase |
Protein accession | YP_003090799 |
Protein GI | 255530427 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.170423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0962099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCAT TACCGGTTGT TTCAGAAAAC CAAGTACAAC GTAAACCAGA TTGGCTTAGA GTAAAGCTTC CTGTTGGCAA AGAATATGCA CAGGTACGTA GCCTTGTAGA TACCCACAAG CTGCACACTA TATGTGAAAG CGGCAATTGC CCCAATATGG GCGAATGTTG GGGTGCAGGA ACAGCAACAT TCATGATTCT TGGCAACATC TGTACCAGGT CATGTTCCTT CTGTGCAGTG GCCACAGGCC GGCCTTTGGC AGTTGACACT GATGAACCCA ATCGTGTAGC AAACTCTGTA AAGCTGATGC AGGTAAAACA CTGTGTAATT ACATCGGTTG ACAGGGACGA CCTAAAAGAC GGCGGATCCA TCATCTGGGC CGAGACCCTG CAGGCGATTA GAAGAGAAAG TCCTGAAACT ACGTTGGAAA CCCTTATCCC TGATTTTAAA GGTCAGTGGG ATAACCTTTA CCGGGTTTTA GAAGAACGCC CGGAAGTGAT GTCGCACAAC GTGGAAACTG TAAGACGTTT GACCAAACAG GTACGTATCC AGGCCAAATA CGACAGGAGC CTCGAAGCAC TGAAACGCAT ATCTGAATTC GGGTTAAGAA CCAAAACTGG CATCATGCTT GGACTAGGTG AAACTGAAGC AGATGTTTTG GAAGCAATGG ACGATCTGGT AGCCAATGGA GTACACATTT TAACCCTCGG ACAATACCTG CAACCTACAC GTAACCATCA CCCTGTGGTA GACTGGATAC ATCCTGACCA GTTTGCCAAA TATAAAGAAA TCGGATTGGC CAAAGGGTTA AGGTATGTTG AGAGCGGGCC GCTTGTACGT TCCTCTTATC ACGCAGAAAA ACACCTGTTC AATTTTTAG
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Protein sequence | MIALPVVSEN QVQRKPDWLR VKLPVGKEYA QVRSLVDTHK LHTICESGNC PNMGECWGAG TATFMILGNI CTRSCSFCAV ATGRPLAVDT DEPNRVANSV KLMQVKHCVI TSVDRDDLKD GGSIIWAETL QAIRRESPET TLETLIPDFK GQWDNLYRVL EERPEVMSHN VETVRRLTKQ VRIQAKYDRS LEALKRISEF GLRTKTGIML GLGETEADVL EAMDDLVANG VHILTLGQYL QPTRNHHPVV DWIHPDQFAK YKEIGLAKGL RYVESGPLVR SSYHAEKHLF NF
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