| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5761 |
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| Symbol | |
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| ID | 8229377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6918705 |
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| End bp | 6922319 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644933606 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003090114 |
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| Protein GI | 255039493 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.122146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA TTTTATCCCA AACCGACTGG CAGACTATTC ACCACACACT TCAACATTTA
AACCTGATCG GAATTACTTT TTCGCCCGAT TTTGTGATCC GCAGCGTGAG CCCGCATGCG
CTCATGAAAA CCGGCTGGCA CGAGTCGGAG CTGGTGGGTT TCAGTATATT CGATAAGCTG
ATCCCGAGGG ATGAGGAACA CGAGGTTCGG CAGATGCTCG AAGAGGGTAT ACAGGGCAAG
CGGAAGCTGG AACAGCGGGA GGTGCCATTC CTGGCACAAA AGGGGACATT GCGCACATTC
TCGATCAACT CCGTGCTGAT TCATCAGCAA AATGGTGACG TTGAATGCAT TACCCTCGTA
GGCGACGATA TTACACGTCG CCGGCGAATG GAATCCGCCA TTGCCAAGTC GAATTCGCAG
TTGCAGGACC TGGTGGATAA TACGAGCGAT CTCATCCAGC TCGTGGCGAT CGACGGCAAG
TTCATTTTCG TTAACAAAGC CTGGCGCGAG GTGCTGGGCT ACGGGCTCGA CGAAATCGCG
TCCATGCGGA TGGAGGATAT TCTGCATCCC CAGCACAAGG AGGAAGCGCT CGAACAGCTG
AAAAAGATCG AACAAGGTAT CGCCAATCCA AGCTTCGAGG CGGTTTTTAT GAACCGCGAC
GGGAAGAAAG TATTCGTGGC CGGAAGTGTA AACTGCCGTT TCGACAATGG CAAACCGACC
GCATTCCGGT GTATTTTAAA TGATTTTACA GAAAAGATAA GGGCTGAGAA GGCGCAAAAC
CTGTATTACA GCATTGCCAA CTGGACGGTC AACACGCAAA ATCTTGACGA ATTTTACCAC
GGTATCCACG ATGAACTAGG TAAGATCATC GACGTGCGCA ACTTCTTCAT CGCGCTTTAC
GACCCGAGCA AAAGCTACAT TTATTTCCCT TATTATGTGG ATCAATATTT CAAGGGAAAT
GTGCGGTTTA CCAAAAGGAA ACTGGGCAAT GGCTTGACCG AATACGCAAT TGCGTCCAAT
AAGCCGTTGT TTTTGTCGGA TACGGACATT GAAAAACTGG CCAAAACCAA CAGCCTTTAC
CTCTACGGTG TTACGCCGAA AGTGCTTTTG TGCGTGCCCT TGCGTATTGG CGACCGGGTA
ACGGGTATTA TCGGGGTTAA GTCTTATGAT GATCCGAATA TGTTCGATAC CCGCGACCTG
GAATTGTTGG AATTTATTTC CGGACAGGTG GCTATGGCCA TCGCCAGGAA GCAAAGCGAA
GAAGAATTGA GCAAATACCT GGCGCGCTTA AATGCGATTT TCGATAGCAG TTCGCATTTG
ATATGGTCGG TGAATAAGTC GCTGCAACTG ACTTCATTCA ACAGAAACTA CGCGGATCTG
ATTCATAATC AGCTTGGTGT GCGGCCGTCG CTGCAATCGA GCGCGGAGAA ATTCGGCTGG
CGGATGGTGG GCAACAGCAA CCGCCGCACG CTCGAAACGA AGTACCGGCA GGCATTGCGC
GGCGAACCGC AGTATTTCGA ATTTAAGATC GACCGCAAGG ATGCCGGCGA AATGTGGCTC
GAATTTTACC TGAACCCCAT CCACTATGCC GACGGCGTGA TCGAAGAAGT GTCGGGTATT
GCCCGTGACA TTACCCGGCG GAAAGAGGCC GAACTATCGC TGAGGCACAG TGAGGAGCTT
TTCAGGGGTA TTTTTGAAAA CTTGCAGGAT ATTTATTGCC GGATCAACCG CCTTGGCGAG
ATTACGATGA TCAGCCAGTC GGTGCTGAAA CGCCTGGGTT ATCTGCCGGA AGAAGTGATC
GGTCACAAGA TTACCGAGTT TTTTGCGGAC AAAAAGCGCA TTCACTCTGC ATTGATACGG
CTTCGGAAAA CCAAAAGTCT GCGGAATTTC GAGATCACGA TGTACCGCAA AGATGGTACG
GAGCGCCAGT TTATGATCAA TATGCTGATG TTCACGAATG ACAAAGGCAA ACCAACCGAA
GTGGCGGTTC TCGCCCGCGA CATTACTGAA CTGAAACGCA ATGAACTCGA ATTGCTGAAA
GCCAAGGAGC ATGCGGAACG TTCCCTGAAG GTAAAAGAAG GTTTTTTGGC CAACATGAGC
CACGAAATCC GCACGCCGAT GAACGGCGTG ATCGGGATGA TCGACCTGCT GGGCGAAACG
CCGCTGAATA CGGAGCAAAA GGATTATGTA CTAACGATCA AACGGTCGTC GGAAACGCTG
CTGAACATTC TGAACGACAT TCTTGACCTT TCGAAAATCG AGGCGGGAAA AATGGAGCTG
CACGAAGCAC CGATTGCGGT GGAAGAGCTG CTGCTCAAAC TGGTGTCGCT TTTCGGGCAA
ACGGCCAAAA GCAAGGGCAA TACACTGAGC TACCACGTCG GACCGGACAT TCCCAAATTC
ATCATCGCCG ATCAAACGAG GTTGCTGCAA ATCATGTCCA ACCTCACGTC CAATGCATTG
AAATTCACAG AGAATGGTTC TGTGAAGGTC TTTCTCACAT TGGTCAAAAA GGATGGTCTG
TTCCACAAGA TCAAGGTAGA TGTGCAGGAT TCGGGGATTG GTATCAGCGC CACCGACAAG
CAGATTCTGT TTACCTCATT TACACAGCTT GATAACTCAT CACGCAAATC ATTCGGCGGC
ACCGGTCTCG GACTGGCCAT TTCGAAACAG CTTTGCGCAT TGATGAACGG CGAAATCGGT
GTGGAATCGA CGCTGGGCGA GGGGAGCACG TTCTGGTTTA CATTTGAAAC AAAGGAAACT
TCTATTGCCC AGGTAGGCAC CGTCACGCAG CTTGAAGATA CGCCTATCGA GGACGTGTTT
ACCGATTACC ACCCGTCTAT CCTCCTCGTG GACGACAATG CCGTGAACCG GAAGGTAGCC
AACGAGATCC TTAAAAAATC GGGCTGCGAG ACGGATATGG CGGAGAGTGG TTTCAAGGCG
ATCGAAATGG TAGAAAAACG GTACCATTCC GATGCGAAAG GCTATGATAT CATCTTCATG
GATATTCAAA TGCCTGATAT GGATGGGGTG GAAACGACCC AGGAGCTTAA AAAGCGCTTT
TCGAAAGGAC TTCCACCGAT TGTTGCCATG ACGGCCTATT CGATGAAGGA GGACCGCGAT
CGCTTTATGA GCCAGGGAAT GGACGATTAC ATTGCCAAGC CCATTCGGGC ACAAACGCTC
GTTCAGAAGG TGAAAGACCT CATGGGCAAC ATCGAAGGCC GCAAACTTGA ACAGAAACAG
AAGGAAATCG CGCAGGAGGC CATGTCGCCT GTGCTGGATA AGGAGATTAT CGACCAACTG
GCGGGTATCG GCGGCGCCGA CCTCGTATGG TCGGTATTCG AGGATTTCGT TACGGAATCG
GACGAATTGG TGGCGGGTGC ATTGGAGGCT TACAAAACCG GCGATATCAA AACGGTGAAA
AGCAATTTGC ATACGCTCAA AGGCAGCGGC GGCACGGTAG GTGTGCATCA GGTTGCAGAA
ATTGCGCGCG ATGCAGAGTG GCGGCTCAAA TCGGACGACA CGAGTACGCT TGCCGAAGCG
CTCCCGCAGT TGGAGAAGGC ATATGAGCGA TTTTTGGCCA GCTACAAGGG TTTGCTGGGC
GAATGGCTGA AATAA
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| Protein sequence | MELILSQTDW QTIHHTLQHL NLIGITFSPD FVIRSVSPHA LMKTGWHESE LVGFSIFDKL
IPRDEEHEVR QMLEEGIQGK RKLEQREVPF LAQKGTLRTF SINSVLIHQQ NGDVECITLV
GDDITRRRRM ESAIAKSNSQ LQDLVDNTSD LIQLVAIDGK FIFVNKAWRE VLGYGLDEIA
SMRMEDILHP QHKEEALEQL KKIEQGIANP SFEAVFMNRD GKKVFVAGSV NCRFDNGKPT
AFRCILNDFT EKIRAEKAQN LYYSIANWTV NTQNLDEFYH GIHDELGKII DVRNFFIALY
DPSKSYIYFP YYVDQYFKGN VRFTKRKLGN GLTEYAIASN KPLFLSDTDI EKLAKTNSLY
LYGVTPKVLL CVPLRIGDRV TGIIGVKSYD DPNMFDTRDL ELLEFISGQV AMAIARKQSE
EELSKYLARL NAIFDSSSHL IWSVNKSLQL TSFNRNYADL IHNQLGVRPS LQSSAEKFGW
RMVGNSNRRT LETKYRQALR GEPQYFEFKI DRKDAGEMWL EFYLNPIHYA DGVIEEVSGI
ARDITRRKEA ELSLRHSEEL FRGIFENLQD IYCRINRLGE ITMISQSVLK RLGYLPEEVI
GHKITEFFAD KKRIHSALIR LRKTKSLRNF EITMYRKDGT ERQFMINMLM FTNDKGKPTE
VAVLARDITE LKRNELELLK AKEHAERSLK VKEGFLANMS HEIRTPMNGV IGMIDLLGET
PLNTEQKDYV LTIKRSSETL LNILNDILDL SKIEAGKMEL HEAPIAVEEL LLKLVSLFGQ
TAKSKGNTLS YHVGPDIPKF IIADQTRLLQ IMSNLTSNAL KFTENGSVKV FLTLVKKDGL
FHKIKVDVQD SGIGISATDK QILFTSFTQL DNSSRKSFGG TGLGLAISKQ LCALMNGEIG
VESTLGEGST FWFTFETKET SIAQVGTVTQ LEDTPIEDVF TDYHPSILLV DDNAVNRKVA
NEILKKSGCE TDMAESGFKA IEMVEKRYHS DAKGYDIIFM DIQMPDMDGV ETTQELKKRF
SKGLPPIVAM TAYSMKEDRD RFMSQGMDDY IAKPIRAQTL VQKVKDLMGN IEGRKLEQKQ
KEIAQEAMSP VLDKEIIDQL AGIGGADLVW SVFEDFVTES DELVAGALEA YKTGDIKTVK
SNLHTLKGSG GTVGVHQVAE IARDAEWRLK SDDTSTLAEA LPQLEKAYER FLASYKGLLG
EWLK
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